Pairwise Alignments

Query, 263 a.a., AraC family transcriptional regulator from Vibrio cholerae E7946 ATCC 55056

Subject, 272 a.a., DNA-binding transcriptional regulator NimR from Escherichia coli ECRC62

 Score =  125 bits (315), Expect = 7e-34
 Identities = 70/221 (31%), Positives = 113/221 (51%), Gaps = 1/221 (0%)

Query: 37  HSHPWGQVQLISGGILEMEAEDTRFLAPPHLAIWVPAGIRHRSYNRKPIEYCSLNIASQL 96
           H H  GQ+ L   G +    E+  ++ PP  A+W+P G+ H +      E C L I    
Sbjct: 35  HQHRKGQLILALHGAITCTVENALWMVPPQYAVWIPGGVEHSNQVTANAELCFLFIEPSA 94

Query: 97  TTAFPAKTSLIKVTSIVSAIIDDFRERNINVAQSCEDKRLVQVLLDQLATRETQHHFLPS 156
            T  P     +K++ +   +I     R          +RL+QVL D+L  +  Q   LP 
Sbjct: 95  VT-MPTTCCTLKISPLCRELILTLANRTTTQRAEPMTRRLIQVLFDELPQQPQQQLHLPV 153

Query: 157 TNHKYLAPILAFVEENPTDNTTLQQWAEKVHTTERTLARHCQAELGMSFTEWRLRVRYLY 216
           ++H  +  ++  + + P +  +L QWA     +ER LAR    E G+SF +WR +++ + 
Sbjct: 154 SSHPKIRTMVEMMAKGPVEWGSLGQWAGFFAMSERNLARLIVKETGLSFRQWRQQLQLIM 213

Query: 217 SMELLRQGHAVKEVALTLGYNQASPFITMFKKYSGLTPEQY 257
           +++ L +G  V++VA TLGY+  + FITMFKK  G TP +Y
Sbjct: 214 ALQGLVKGDTVQKVAHTLGYDSTTAFITMFKKGLGQTPGRY 254