Pairwise Alignments

Query, 263 a.a., AraC family transcriptional regulator from Vibrio cholerae E7946 ATCC 55056

Subject, 215 a.a., AraC family transcriptional regulator from Agrobacterium fabrum C58

 Score =  105 bits (261), Expect = 1e-27
 Identities = 57/197 (28%), Positives = 104/197 (52%), Gaps = 3/197 (1%)

Query: 61  FLAPPHLAIWVPAGIRHRSYNRKPIEYCSLNIASQLTTAFPAKTSLIKVTSIVSAIIDDF 120
           ++ PPH  +WVP G+ H +          L I        P +   + ++ +V  +I + 
Sbjct: 16  WMVPPHCGVWVPGGMLHSNVATANARLFFLFIEPGAAD-LPNRCCTLSLSPLVRELIIEL 74

Query: 121 RERNINVAQSCEDKRLVQVLLDQLATRETQHHFLPSTNHKYLAPILAFVEENPTDNTTLQ 180
            +++     + + + +  +LL  L+    +H  LP T+   LA I + + ++P+D +T+ 
Sbjct: 75  ADQS--EVATADSELMTTLLLSALSRMPVEHLHLPLTDEPRLARIASELADDPSDRSTMA 132

Query: 181 QWAEKVHTTERTLARHCQAELGMSFTEWRLRVRYLYSMELLRQGHAVKEVALTLGYNQAS 240
           QWA +V  +E +LAR  Q + G++F  WR +++ + ++  L  G  V++V+  LGY   S
Sbjct: 133 QWARRVAMSENSLARLVQHQTGLTFGRWRQQLQLIIAIRSLASGATVQQVSGDLGYESVS 192

Query: 241 PFITMFKKYSGLTPEQY 257
            FITMFKK  G +P +Y
Sbjct: 193 AFITMFKKALGTSPSRY 209