Pairwise Alignments

Query, 263 a.a., AraC family transcriptional regulator from Vibrio cholerae E7946 ATCC 55056

Subject, 254 a.a., HTH-type transcriptional regulator NimR from Acinetobacter radioresistens SK82

 Score = 88.6 bits (218), Expect = 1e-22
 Identities = 55/227 (24%), Positives = 107/227 (47%), Gaps = 2/227 (0%)

Query: 36  EHSHPWGQVQLIS--GGILEMEAEDTRFLAPPHLAIWVPAGIRHRSYNRKPIEYCSLNIA 93
           E +H   ++QL+    G++ +   +  ++ PP   IW+P   RH       +E   + + 
Sbjct: 25  EGTHRHDRIQLLHTLSGVIHVRTSEGIWVIPPSKGIWIPENKRHSIKIFGNVEARGIFVD 84

Query: 94  SQLTTAFPAKTSLIKVTSIVSAIIDDFRERNINVAQSCEDKRLVQVLLDQLATRETQHHF 153
                 F  + S++ +  ++S +I+   +    +     ++RL++++LD+L   E     
Sbjct: 85  PFARADFNTQCSVVAIPKLLSELINQAVQIKEEILPHTRNERLLELILDELRFLEEIPFR 144

Query: 154 LPSTNHKYLAPILAFVEENPTDNTTLQQWAEKVHTTERTLARHCQAELGMSFTEWRLRVR 213
           LP    + L  I   ++ + +    L+  A++     +TL+R  Q EL M+F+ W  + +
Sbjct: 145 LPEAKSEILKEICENIKADLSATNHLEMVAKQHALNSKTLSRLFQKELNMNFSVWLKQAK 204

Query: 214 YLYSMELLRQGHAVKEVALTLGYNQASPFITMFKKYSGLTPEQYKSR 260
            L ++  L     +  +AL LGY   S F  MFK+  G+TP +Y  R
Sbjct: 205 LLQALTDLEMRKPILNIALDLGYESPSAFSYMFKRQMGMTPTEYIKR 251