Pairwise Alignments

Query, 311 a.a., DUF808 domain-containing protein from Vibrio cholerae E7946 ATCC 55056

Subject, 298 a.a., Inner membrane protein YedI from Methylophilus sp. DMC18

 Score =  297 bits (761), Expect = 2e-85
 Identities = 168/309 (54%), Positives = 218/309 (70%), Gaps = 23/309 (7%)

Query: 1   MAGASLLTLLDDIATVLDDVALMSKMAAKKTAGVLGDDLALNAQQVSGVAAEREIPVVWA 60
           MA  SLL LLDDI T+LDDV++MS++AAKKTAGVLGDDLALNAQQV+G+AA+RE+PVVWA
Sbjct: 1   MATPSLLALLDDITTMLDDVSVMSQLAAKKTAGVLGDDLALNAQQVTGIAAKRELPVVWA 60

Query: 61  VAKGSFRNKLILVPAALIISSIAPWLIMPLLLIGGLFLCFEGAEKILEKWLHPEPKQNAE 120
           VA+GS  NKLILVPAAL+IS+  PWLI PLL++GG FLCFEG EK+  K  H +    +E
Sbjct: 61  VARGSLLNKLILVPAALLISAFLPWLITPLLMLGGAFLCFEGFEKVWHKLRHDKHSDTSE 120

Query: 121 QRAAAIVNEGLETESLATESLAEYEKRKIGGAIRTDFILSAEIIVIALGTVQGHSMLTQI 180
           Q   A + +  ET+      L   E+ KI GA+RTDFILSAEIIVIALG V   ++  +I
Sbjct: 121 QAIHAAMQQP-ETD------LVALEQEKIKGAVRTDFILSAEIIVIALGVVADAAITQRI 173

Query: 181 LVVSLIAVIMTIGVYGLVAGIVKLDDLGFYLQRQSKGQGLKAS----LGGVLVRFAPKLM 236
           LV+SLIAV+MT+GVYGLVA IVK+DD+G +L ++S G  L AS     G  +V+  P LM
Sbjct: 174 LVLSLIAVVMTLGVYGLVALIVKMDDIGLWLMQRS-GYHLLASAARKTGWGMVQTVPYLM 232

Query: 237 KGLTVVGTAAMFLVGGGIVVHNVPAVHHILEPMLDVVHAWPVVGTLMPTLMNGVIGVVAG 296
           + L++VGTAAMFLVGGGI+ H  P +H ++E        W           N +IG++AG
Sbjct: 233 RLLSIVGTAAMFLVGGGILAHGTPPLHALIEQSPQWTLLW-----------NALIGILAG 281

Query: 297 SLLVAVMEV 305
           ++   ++ +
Sbjct: 282 AICFVLIHI 290