Pairwise Alignments

Query, 311 a.a., DUF808 domain-containing protein from Vibrio cholerae E7946 ATCC 55056

Subject, 305 a.a., conserved inner membrane protein (NCBI) from Escherichia coli BW25113

 Score =  314 bits (804), Expect = 2e-90
 Identities = 173/314 (55%), Positives = 221/314 (70%), Gaps = 17/314 (5%)

Query: 1   MAGASLLTLLDDIATVLDDVALMSKMAAKKTAGVLGDDLALNAQQVSGVAAEREIPVVWA 60
           +AG+SLLTLLDDIAT+LDD+++M K+AAKKTAGVLGDDL+LNAQQVSGV A RE+PVVW 
Sbjct: 3   LAGSSLLTLLDDIATLLDDISVMGKLAAKKTAGVLGDDLSLNAQQVSGVRANRELPVVWG 62

Query: 61  VAKGSFRNKLILVPAALIISSIAPWLIMPLLLIGGLFLCFEGAEKI---LEKWLHPEPKQ 117
           VAKGS  NK+ILVP ALIIS+  PW I PLL+IGG FLCFEG EK+   LE   H E   
Sbjct: 63  VAKGSLINKVILVPLALIISAFIPWAITPLLMIGGAFLCFEGVEKVLHMLEARKHKEDPA 122

Query: 118 NAEQRAAAIVNEGLETESLATESLAEYEKRKIGGAIRTDFILSAEIIVIALGTVQGHSML 177
            ++QR           E LA +   ++EK KI GAIRTDFILSAEI+ I LG V    +L
Sbjct: 123 QSQQR----------LEKLAAQDPLKFEKDKIKGAIRTDFILSAEIVAITLGIVAEAPLL 172

Query: 178 TQILVVSLIAVIMTIGVYGLVAGIVKLDDLGFYLQRQSKGQGLKASLGGVLVRFAPKLMK 237
            Q+LV+S IA+++T+GVYGLV  IVK+DDLG++L    K   L  +LG  L+  AP LMK
Sbjct: 173 NQVLVLSGIALVVTVGVYGLVGVIVKIDDLGYWL--AEKSSALMQALGKGLLIIAPWLMK 230

Query: 238 GLTVVGTAAMFLVGGGIVVHNVPAVHHILEPMLDVVHAWPVVGTLMPTLMNGVIGVVAGS 297
            L++VGT AMFLVGGGIVVH +  +HH +E       A  VV  ++PT++N ++G + G 
Sbjct: 231 ALSIVGTLAMFLVGGGIVVHGIAPLHHAIEHFAGQQSA--VVAMILPTVLNLILGFIIGG 288

Query: 298 LLVAVMEVWHKVRG 311
           ++V  ++   K+RG
Sbjct: 289 IVVLGVKAVEKMRG 302