Pairwise Alignments

Query, 375 a.a., 23S rRNA (uracil(747)-C(5))-methyltransferase RlmC from Vibrio cholerae E7946 ATCC 55056

Subject, 359 a.a., tRNA (uracil-5-)-methyltransferase from Pseudomonas simiae WCS417

 Score = 65.1 bits (157), Expect = 3e-15
 Identities = 52/189 (27%), Positives = 88/189 (46%), Gaps = 31/189 (16%)

Query: 209 SFFQTNPKVAEQLYATARTWVREIA---PTQMWDLFCGVGGFALHCAAPDTAVTGIEIEP 265
           +F Q N  V +++      W  E     P  + +L+CG G F L  A     V   EI  
Sbjct: 180 AFTQPNGTVNQKML----NWAYEALGDRPDDLLELYCGNGNFTLPLATRVRKVLATEISK 235

Query: 266 EAIASAQRSAQMMGIDNLSFAALDSAKFSQS--------QMSAPEL-------VLVNPPR 310
            ++ +A  +     +DN++   L + + +++        ++   +L       V V+PPR
Sbjct: 236 TSVNAALSNLDENAVDNVTLVRLSAEELTEALNEVRPFRRLHGIDLKSYEFGSVFVDPPR 295

Query: 311 RGLG---SELTAQLEALAPKYILYSSCNPQTMVKDIAEL-SSYQMIRVQWFDMFPHTDHA 366
            G+     ELT + +      ILY SCNP+T+  +IA+L  ++++ +   FD FP T H 
Sbjct: 296 AGMDPDTCELTRRFD-----NILYISCNPETLAANIAQLHDTHKITQCAMFDQFPWTHHM 350

Query: 367 EVLTLLVRK 375
           E   LL R+
Sbjct: 351 ESGVLLTRR 359