Pairwise Alignments

Query, 375 a.a., 23S rRNA (uracil(747)-C(5))-methyltransferase RlmC from Vibrio cholerae E7946 ATCC 55056

Subject, 369 a.a., tRNA (uridine(54)-C5)-methyltransferase TrmA from Vibrio cholerae E7946 ATCC 55056

 Score = 75.5 bits (184), Expect = 2e-18
 Identities = 52/185 (28%), Positives = 89/185 (48%), Gaps = 21/185 (11%)

Query: 209 SFFQTNPKVAEQLYATARTWVREIAPTQMWDLFCGVGGFALHCAAPDTAVTGIEIEPEAI 268
           SF Q N KVAE++   A    +E +   + +L+CG G F+L  A     V   E+   ++
Sbjct: 187 SFTQPNAKVAEKMLEWAVDCTQE-SKGDLLELYCGNGNFSLALAQNFERVLATELAKPSV 245

Query: 269 ASAQRSAQMMGIDNLSFAALDSAKFSQSQMSAPEL-----------------VLVNPPRR 311
            +AQ +     I N+    + + +F+Q+     E                  + V+PPR 
Sbjct: 246 EAAQFNIAANQIGNVQIIRMSAEEFTQAMEGKREFNRLKDAGVDLQSYRCNTIFVDPPRS 305

Query: 312 GLGSELTAQLEALAPKYILYSSCNPQTMVKDIAELS-SYQMIRVQWFDMFPHTDHAEVLT 370
           G+  +    ++    + ILY SCNP+T+ +++  L  ++Q++R   FD FP+T H E   
Sbjct: 306 GMDIDTCKMVQGY--ERILYISCNPETLQENLQVLGETHQVVRFALFDQFPYTHHMEAGV 363

Query: 371 LLVRK 375
           +L RK
Sbjct: 364 MLERK 368