Pairwise Alignments

Query, 375 a.a., 23S rRNA (uracil(747)-C(5))-methyltransferase RlmC from Vibrio cholerae E7946 ATCC 55056

Subject, 361 a.a., tRNA/tmRNA (uracil-C(5))-methyltransferase from Pseudomonas putida KT2440

 Score = 70.1 bits (170), Expect = 9e-17
 Identities = 55/186 (29%), Positives = 90/186 (48%), Gaps = 25/186 (13%)

Query: 209 SFFQTNPKVAEQLYATARTWVREIAPTQMWDLFCGVGGFALHCAAPDTAVTGIEIEPEAI 268
           +F Q N  V +++ + A   + E     + +L+CG G F L  A     V   EI   ++
Sbjct: 182 AFTQPNGAVNQKMLSWAFEAIGE-REDDLLELYCGNGNFTLPLATRVRQVLATEISKTSV 240

Query: 269 ASAQRSAQMMGIDNLSFAALDSAKFSQS--------QMSAPEL-------VLVNPPRRGL 313
            +A  +     +DN+    L + + +Q+        ++   +L       V V+PPR G+
Sbjct: 241 NAALSNLDENAVDNVRLVRLSAEELTQALNEVRPFRRLEGIDLKSYQFGTVFVDPPRAGM 300

Query: 314 G---SELTAQLEALAPKYILYSSCNPQTMVKDIAEL-SSYQMIRVQWFDMFPHTDHAEVL 369
                ELT + E      ILY SCNP+T+  +IA+L  ++++ R   FD FP+T H E  
Sbjct: 301 DPDTCELTRRFER-----ILYISCNPETLAANIAQLQDTHRIERCALFDQFPYTHHMESG 355

Query: 370 TLLVRK 375
            LLVR+
Sbjct: 356 VLLVRR 361