Pairwise Alignments

Query, 375 a.a., 23S rRNA (uracil(747)-C(5))-methyltransferase RlmC from Vibrio cholerae E7946 ATCC 55056

Subject, 375 a.a., 23S rRNA (uracil(747)-C(5))-methyltransferase RlmC from Pectobacterium carotovorum WPP14

 Score =  398 bits (1023), Expect = e-115
 Identities = 198/374 (52%), Positives = 254/374 (67%)

Query: 1   MQCEFFIQKRCTSCHLCAQPYSEQVTNKDQQLRELIAPATDVQWLPPVTSADTAFRNKAK 60
           M C  +    C SC    + Y +Q+++K Q L  L+ P    +WLP   SA +AFRNKAK
Sbjct: 1   MHCARYSTGTCRSCQWLEKAYPQQLSDKQQHLEGLLPPHAVQRWLPVQPSAQSAFRNKAK 60

Query: 61  MVVLGAAHAPILGIEDAQGQPLSLVTCPLYPQPMQELLAYLENWIRIAGIPPYNKLKKKG 120
           MVV G+   P+LG+    G  + L  CPLYP     +   L+ +I  AG+ PYN  +++G
Sbjct: 61  MVVSGSVERPLLGMLHRDGTAVDLCDCPLYPSSFAPVFDVLKVFIARAGLTPYNVARRRG 120

Query: 121 ELKFILLTRSENSGQFMLRFVARSHAVLERIERNLPTLIAAFPMIEVISVNIQPVHMARL 180
           ELK++LLT S   G FMLRFV RS   L ++   LP L    P +EVIS NIQPVH A +
Sbjct: 121 ELKYLLLTESTQHGTFMLRFVLRSETKLAQLRAALPWLQQQLPQLEVISANIQPVHQAIM 180

Query: 181 EGEEEIFLTETQSLLEHFNDVPMVIRPKSFFQTNPKVAEQLYATARTWVREIAPTQMWDL 240
           EG+ EI L++  +L E FN VP+ IRP+SFFQTNP+VA  LYATAR WV E+  T MWDL
Sbjct: 181 EGKTEIILSDAAALAEQFNQVPLYIRPQSFFQTNPQVAAALYATARDWVAELDITSMWDL 240

Query: 241 FCGVGGFALHCAAPDTAVTGIEIEPEAIASAQRSAQMMGIDNLSFAALDSAKFSQSQMSA 300
           FCGVGGF LHCA+P+  +TGIEI  EAIA A+RSA+ +G+  + F ALDS +F+ ++   
Sbjct: 241 FCGVGGFGLHCASPEMRLTGIEISAEAIACARRSAEQLGLKQVEFQALDSTQFATAKAEI 300

Query: 301 PELVLVNPPRRGLGSELTAQLEALAPKYILYSSCNPQTMVKDIAELSSYQMIRVQWFDMF 360
           P+LVLVNPPRRG+GSEL A L  +AP YILYSSCN ++M KD+ EL++Y+ +RVQ FDMF
Sbjct: 301 PDLVLVNPPRRGIGSELCAYLSRMAPDYILYSSCNAESMAKDMTELANYRALRVQLFDMF 360

Query: 361 PHTDHAEVLTLLVR 374
           PHT H EVLTLL R
Sbjct: 361 PHTAHYEVLTLLKR 374