Pairwise Alignments

Query, 375 a.a., 23S rRNA (uracil(747)-C(5))-methyltransferase RlmC from Vibrio cholerae E7946 ATCC 55056

Subject, 431 a.a., 23S rRNA (Uracil-5-) -methyltransferase RumA (EC 2.1.1.-) from Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868

 Score = 92.0 bits (227), Expect = 3e-23
 Identities = 57/177 (32%), Positives = 89/177 (50%), Gaps = 6/177 (3%)

Query: 203 MVIRPKSFFQTNPKVAEQLYATARTWVREIAPTQMWDLFCGVGGFALHCAAPDTAVTGIE 262
           +   P+ F Q N  V +Q+ A A  W+   A  ++ DLFCG+G F L  A    +V G+E
Sbjct: 255 LAFSPRDFIQVNEAVNQQMVARALEWLDVRAEDRVLDLFCGMGNFTLPLATRAASVIGVE 314

Query: 263 IEPEAIASAQRSAQMMGIDNLSFAALDSAKFSQSQMSAP---ELVLVNPPRRGLGSELTA 319
             P  +   + +A   G+ N++F   +  +    Q  A    + VL++P R G  + +  
Sbjct: 315 GVPALVEKGRENAIRNGLHNVTFFHENLEEDVTKQPWAKNGFDKVLLDPARAG-ATGVMR 373

Query: 320 QLEALAPKYILYSSCNPQTMVKDIAEL--SSYQMIRVQWFDMFPHTDHAEVLTLLVR 374
            +  L P  I+Y SCNP T+ +D   L  + Y++ R+   DMFPHT H E + L  R
Sbjct: 374 HIIKLKPIRIVYVSCNPATLARDSEALVNAGYEVTRLAMLDMFPHTGHLESMVLFER 430