Pairwise Alignments

Query, 375 a.a., 23S rRNA (uracil(747)-C(5))-methyltransferase RlmC from Vibrio cholerae E7946 ATCC 55056

Subject, 433 a.a., 23S rRNA (uracil-5-)-methyltransferase (NCBI) from Escherichia coli BW25113

 Score = 96.3 bits (238), Expect = 1e-24
 Identities = 58/181 (32%), Positives = 93/181 (51%), Gaps = 6/181 (3%)

Query: 199 NDVPMVIRPKSFFQTNPKVAEQLYATARTWVREIAPTQMWDLFCGVGGFALHCAAPDTAV 258
           N + +   P+ F Q N  V +++ A A  W+      ++ DLFCG+G F L  A    +V
Sbjct: 252 NGLRLTFSPRDFIQVNAGVNQKMVARALEWLDVQPEDRVLDLFCGMGNFTLPLATQAASV 311

Query: 259 TGIEIEPEAIASAQRSAQMMGIDNLSFAALDSAKFSQSQMSAP---ELVLVNPPRRGLGS 315
            G+E  P  +   Q++A++ G+ N++F   +  +    Q  A    + VL++P R G  +
Sbjct: 312 VGVEGVPALVEKGQQNARLNGLQNVTFYHENLEEDVTKQPWAKNGFDKVLLDPARAG-AA 370

Query: 316 ELTAQLEALAPKYILYSSCNPQTMVKDIAEL--SSYQMIRVQWFDMFPHTDHAEVLTLLV 373
            +  Q+  L P  I+Y SCNP T+ +D   L  + Y + R+   DMFPHT H E + L  
Sbjct: 371 GVMQQIIKLEPIRIVYVSCNPATLARDSEALLKAGYTIARLAMLDMFPHTGHLESMVLFS 430

Query: 374 R 374
           R
Sbjct: 431 R 431