Pairwise Alignments

Query, 375 a.a., 23S rRNA (uracil(747)-C(5))-methyltransferase RlmC from Vibrio cholerae E7946 ATCC 55056

Subject, 277 a.a., N5-glutamine S-adenosyl-L-methionine-dependent methyltransferase (NCBI) from Escherichia coli BW25113

 Score = 41.6 bits (96), Expect = 3e-08
 Identities = 44/168 (26%), Positives = 71/168 (42%), Gaps = 14/168 (8%)

Query: 147 VLERIERNLPTLIAAFPMIEVISVNIQPVHMA---RLEGEEEIFLTETQSLLEHFNDVPM 203
           +LE +     T I AF   ++     Q +      R +GE    LT  +     F  +P+
Sbjct: 27  LLEHVTGRGRTFILAFGETQLTDEQCQQLDALLTRRRDGEPIAHLTGVRE----FWSLPL 82

Query: 204 VIRPKSFFQTNPKVAEQLYATARTWVREIAPTQMWDLFCGVGGFALHCAA--PDTAVTGI 261
            + P +             A AR   +   P ++ DL  G G  AL  A+  PD  +  +
Sbjct: 83  FVSPATLIPRPDTECLVEQALARLPEQ---PCRILDLGTGTGAIALALASERPDCEIIAV 139

Query: 262 EIEPEAIASAQRSAQMMGIDNLSFAALDSAKFSQSQMSAPELVLVNPP 309
           +  P+A++ AQR+AQ + I N+    L S  FS        +++ NPP
Sbjct: 140 DRMPDAVSLAQRNAQHLAIKNIHI--LQSDWFSALAGQQFAMIVSNPP 185