Pairwise Alignments

Query, 375 a.a., 23S rRNA (uracil(747)-C(5))-methyltransferase RlmC from Vibrio cholerae E7946 ATCC 55056

Subject, 451 a.a., 23S rRNA (uracil(1939)-C(5))-methyltransferase RlmD from Fusobacterium nucleatum SB010

 Score =  112 bits (280), Expect = 2e-29
 Identities = 75/269 (27%), Positives = 135/269 (50%), Gaps = 8/269 (2%)

Query: 110 IPPYNKLKKKGELKFILLTRSENSGQFMLRFVARSHAVLERIERNLPTLIAAFPMIEVIS 169
           I  YN++  KG L+ I++ R+ ++ + M+  +  S+ + E I++ L  L      I+ I 
Sbjct: 182 ISVYNEITHKGLLRNIMI-RTNSNNEAMVVLIINSNKITENIKKLLFKLRENISEIKSIY 240

Query: 170 VNIQPVHMARLEGEEEIFLTETQSLLEHFNDVPMVIRPKSFFQTNPKVAEQLYATARTWV 229
           +++       + GE+ I +   +S+ E+ N +   I P SFFQ N K A++LY  A ++ 
Sbjct: 241 ISLNSKKTNTVIGEKNILIYGEKSIKENINGIEFHISPTSFFQINVKQAKRLYDIAISFF 300

Query: 230 REIAPTQMWDLFCGVGGFALHCAAPDTAVTGIEIEPEAIASAQRSAQMMGIDNLSF---- 285
            +I    + D + G G   +  A     V  IEI   A    +++A+  GI+N+ F    
Sbjct: 301 DDIDNKYIVDAYSGTGTIGMIMAKKAKKVYAIEIVKSASEDGEKTAKENGIENIKFINGA 360

Query: 286 AALDSAKFSQSQMSAPELVLVNPPRRGLGSELTAQLEALAPKYILYSSCNPQTMVKDIAE 345
              +  K   +     + ++ +PPR+GL + +  ++  L  K ++Y SCNP T  +D+  
Sbjct: 361 VEKELVKLINNNQKI-DTIIFDPPRKGLEASIIDKVAELNLKEVVYISCNPSTFARDVKL 419

Query: 346 LS--SYQMIRVQWFDMFPHTDHAEVLTLL 372
            S   Y + ++Q  DMFP T H E + L+
Sbjct: 420 FSEKGYVLKKLQAVDMFPQTSHIECVGLI 448