Pairwise Alignments

Query, 375 a.a., 23S rRNA (uracil(747)-C(5))-methyltransferase RlmC from Vibrio cholerae E7946 ATCC 55056

Subject, 370 a.a., tRNA (uracil(54)-C(5))-methyltransferase from Enterobacter asburiae PDN3

 Score = 75.5 bits (184), Expect = 2e-18
 Identities = 56/183 (30%), Positives = 89/183 (48%), Gaps = 19/183 (10%)

Query: 209 SFFQTNPKVAEQLYATARTWVREIAPTQMWDLFCGVGGFALHCAAPDTAVTGIEIEPEAI 268
           SF Q N  +  Q+   A     E +   + +L+CG G F+L  A     V   EI   ++
Sbjct: 191 SFTQPNAAMNVQMLEWALK-ATEGSTGDLLELYCGNGNFSLALARNFDRVLATEIAKPSV 249

Query: 269 ASAQRSAQMMGIDNLSFAALDSAKFSQSQMSAP---------------ELVLVNPPRRGL 313
           A+AQ +     IDN+    + + +F+Q+                    E + V+PPR GL
Sbjct: 250 AAAQYNIAANHIDNVQIIRMAAEEFTQAMNGVRQFNRLEGIDLKSYQCETIFVDPPRSGL 309

Query: 314 GSELTAQLEALAPKYILYSSCNPQTMVKDIAEL-SSYQMIRVQWFDMFPHTDHAEVLTLL 372
            SE    ++A  P+ ILY SCNP+T+ K++  L  ++++ R+  FD FP+T H E   LL
Sbjct: 310 DSETEKMVQAY-PR-ILYISCNPETLCKNLETLGQTHKVERLALFDQFPYTHHMECGVLL 367

Query: 373 VRK 375
             +
Sbjct: 368 TAR 370