Pairwise Alignments

Query, 375 a.a., 23S rRNA (uracil(747)-C(5))-methyltransferase RlmC from Vibrio cholerae E7946 ATCC 55056

Subject, 432 a.a., 23S rRNA (uracil-5-)-methyltransferase RumA from Enterobacter asburiae PDN3

 Score = 99.0 bits (245), Expect = 2e-25
 Identities = 60/178 (33%), Positives = 91/178 (51%), Gaps = 6/178 (3%)

Query: 199 NDVPMVIRPKSFFQTNPKVAEQLYATARTWVREIAPTQMWDLFCGVGGFALHCAAPDTAV 258
           N + +   P+ F Q N  V + +   A TW+      ++ DLFCG+G F L  A    +V
Sbjct: 252 NGLRLTFSPRDFIQVNDGVNQLMVEKALTWLDVQKSDRVLDLFCGMGNFTLPLAREAASV 311

Query: 259 TGIEIEPEAIASAQRSAQMMGIDNLSFAALDSAKFSQSQMSAP---ELVLVNPPRRGLGS 315
            G+E     +A  Q +AQ  G+ N++F   +  +    Q  A    + +L++P R G   
Sbjct: 312 VGVEGVEALVAKGQENAQQNGLQNVTFFHQNLEEDVTQQPWAKQGFDKILLDPARAG-AP 370

Query: 316 ELTAQLEALAPKYILYSSCNPQTMVKDIAELSS--YQMIRVQWFDMFPHTDHAEVLTL 371
            + A +  LAPK ++Y SCNP T+ +D   L S  YQ+ R+   DMFPHT H E + L
Sbjct: 371 GVMAHIIKLAPKRVVYVSCNPATLARDSEALISAGYQIQRLAMLDMFPHTGHLESMVL 428