Pairwise Alignments

Query, 375 a.a., 23S rRNA (uracil(747)-C(5))-methyltransferase RlmC from Vibrio cholerae E7946 ATCC 55056

Subject, 366 a.a., tRNA (uridine(54)-C5)-methyltransferase TrmA from Escherichia coli ECRC62

 Score = 78.2 bits (191), Expect = 3e-19
 Identities = 58/183 (31%), Positives = 91/183 (49%), Gaps = 19/183 (10%)

Query: 209 SFFQTNPKVAEQLYATARTWVREIAPTQMWDLFCGVGGFALHCAAPDTAVTGIEIEPEAI 268
           SF Q N  +  Q+   A   V + +   + +L+CG G F+L  A     V   EI   ++
Sbjct: 187 SFTQPNAAMNIQMLEWALD-VTKGSKGDLLELYCGNGNFSLALARNFDRVLATEIAKPSV 245

Query: 269 ASAQRSAQMMGIDNLSFAALDSAKFSQSQMSAPEL---------------VLVNPPRRGL 313
           A+AQ +     IDN+    + + +F+Q+     E                + V+PPR GL
Sbjct: 246 AAAQYNIAANHIDNVQIIRMAAEEFTQAMNGVREFNRLQGIDLKSYQCETIFVDPPRSGL 305

Query: 314 GSELTAQLEALAPKYILYSSCNPQTMVKDIAELS-SYQMIRVQWFDMFPHTDHAEVLTLL 372
            SE    ++A  P+ ILY SCNP+T+ K++  LS ++++ R+  FD FP+T H E   LL
Sbjct: 306 DSETEKMVQAY-PR-ILYISCNPETLCKNLETLSQTHKVERLALFDQFPYTHHMECGVLL 363

Query: 373 VRK 375
             K
Sbjct: 364 TAK 366