Pairwise Alignments

Query, 375 a.a., 23S rRNA (uracil(747)-C(5))-methyltransferase RlmC from Vibrio cholerae E7946 ATCC 55056

Subject, 367 a.a., tRNA (uridine(54)-C5)-methyltransferase TrmA from Dickeya dianthicola ME23

 Score = 70.5 bits (171), Expect = 7e-17
 Identities = 54/183 (29%), Positives = 91/183 (49%), Gaps = 19/183 (10%)

Query: 209 SFFQTNPKVAEQLYATARTWVREIAPTQMWDLFCGVGGFALHCAAPDTAVTGIEIEPEAI 268
           SF Q N  +  Q+   A + V + +   + +L+CG G F+L  A     V   EI   ++
Sbjct: 187 SFTQPNAMMNIQMLEWALS-VTQGSTGDLLELYCGNGNFSLALARNFERVLATEIAKPSV 245

Query: 269 ASAQRSAQMMGIDNLSFAALDSAKFSQSQMSAP---------------ELVLVNPPRRGL 313
           A+AQ +     IDN+    + + +F+Q+                    E + V+PPR GL
Sbjct: 246 AAAQYNIAANQIDNVQIIRMAAEEFTQAMNGVRQFNRLQGIDLAGYRCETIFVDPPRSGL 305

Query: 314 GSELTAQLEALAPKYILYSSCNPQTMVKDIAELS-SYQMIRVQWFDMFPHTDHAEVLTLL 372
             + T +L    P+ ILY SCNP+T+  ++  LS ++++ ++  FD FP+T H E   LL
Sbjct: 306 -DDGTVKLVQAYPR-ILYISCNPETLRANLETLSQTHRISQLALFDQFPYTHHMECGVLL 363

Query: 373 VRK 375
            ++
Sbjct: 364 EKR 366