Pairwise Alignments

Query, 375 a.a., 23S rRNA (uracil(747)-C(5))-methyltransferase RlmC from Vibrio cholerae E7946 ATCC 55056

Subject, 433 a.a., 23S rRNA m(5)U1939 methyltransferase, SAM-dependent from Escherichia coli BL21

 Score = 91.3 bits (225), Expect = 5e-23
 Identities = 57/181 (31%), Positives = 92/181 (50%), Gaps = 6/181 (3%)

Query: 199 NDVPMVIRPKSFFQTNPKVAEQLYATARTWVREIAPTQMWDLFCGVGGFALHCAAPDTAV 258
           N + +   P+ F Q N  V +++ A A   +      ++ DLFCG+G F L  A    +V
Sbjct: 252 NGLRLTFSPRDFIQVNAGVNQKMVARALELLDVQPEDRVLDLFCGMGNFTLPLATQAASV 311

Query: 259 TGIEIEPEAIASAQRSAQMMGIDNLSFAALDSAKFSQSQMSAP---ELVLVNPPRRGLGS 315
            G+E  P  +   Q++A++ G+ N++F   +  +    Q  A    + VL++P R G  +
Sbjct: 312 VGVEGVPALVEKGQQNARLNGLQNVTFYHENLEEDVTKQPWAKNGFDKVLLDPARAG-AA 370

Query: 316 ELTAQLEALAPKYILYSSCNPQTMVKDIAEL--SSYQMIRVQWFDMFPHTDHAEVLTLLV 373
            +  Q+  L P  I+Y SCNP T+ +D   L  + Y + R+   DMFPHT H E + L  
Sbjct: 371 GVMQQIIKLEPIRIVYVSCNPATLARDSEALLKAGYTIARLAMLDMFPHTGHLESMVLFS 430

Query: 374 R 374
           R
Sbjct: 431 R 431