Pairwise Alignments

Query, 375 a.a., 23S rRNA (uracil(747)-C(5))-methyltransferase RlmC from Vibrio cholerae E7946 ATCC 55056

Subject, 365 a.a., tRNA (uracil(54)-C(5))-methyltransferase from Alteromonas macleodii MIT1002

 Score = 72.0 bits (175), Expect = 2e-17
 Identities = 53/183 (28%), Positives = 91/183 (49%), Gaps = 19/183 (10%)

Query: 209 SFFQTNPKVAEQLYATARTWVREIAPTQMWDLFCGVGGFALHCAAPDTAVTGIEIEPEAI 268
           SF Q N +V   +   A   V+ ++   + +++CG G F+L  A     V G EI   ++
Sbjct: 185 SFTQPNAEVNCSMIEWALDCVKPLSG-DLLEMYCGAGNFSLPLALHFDNVVGTEIAKPSV 243

Query: 269 ASAQRSAQMMGIDNLSFAALDSAKFSQ--------SQMSAPEL-------VLVNPPRRGL 313
            +AQ + +   ++N+    L + +F+Q        S++   +L       VLV+PPR GL
Sbjct: 244 QAAQFNIEQNQLNNVKIVRLAAEEFTQAMKGERTFSRLEGIDLSTYNFTTVLVDPPRAGL 303

Query: 314 GSELTAQLEALAPKYILYSSCNPQTMVKDIAELS-SYQMIRVQWFDMFPHTDHAEVLTLL 372
             +    ++      I+Y SCNP+T+ +++  LS ++ + +   FD FP T H E   LL
Sbjct: 304 DEDSLRMIQDY--DNIVYISCNPETLAQNLELLSETHDVAQSALFDQFPFTHHIEAGVLL 361

Query: 373 VRK 375
            RK
Sbjct: 362 TRK 364