Pairwise Alignments

Query, 365 a.a., AraC family transcriptional regulator from Vibrio cholerae E7946 ATCC 55056

Subject, 360 a.a., helix-turn-helix domain-containing protein from Pectobacterium carotovorum WPP14

 Score =  179 bits (454), Expect = 1e-49
 Identities = 123/362 (33%), Positives = 192/362 (53%), Gaps = 37/362 (10%)

Query: 19  MLMIPVPFVVSLMLLLLAVTLYLRLAEQAKS---------ACLFLVLCAATTAVVGLRWT 69
           M  IP+PF+ +L+L++L   +   LA Q K          A L    C A T +V LRW 
Sbjct: 1   MTAIPLPFITALLLVILFFRIQF-LAIQNKETKKRNTKAEAILIGASCLALT-LVALRWG 58

Query: 70  VDWSALRMAQPILASLIPVAAW-CTFTRTHE------KGLSRCYKHLSGPILVLVSLLAQ 122
              +     QP +A+ IP   W C F    +      +   R  +HL  P+L+L +   Q
Sbjct: 59  SHVALPVFIQPAIAASIPPLLWLCLFPYGEKVSDALNRNRRRSLRHLLPPLLILGASAIQ 118

Query: 123 PFWSLPL-DEILTAIYLFYGIALVRYSSQDALRIYVAFNHWENVKRAENIAGWMLLFSAL 181
              ++PL D +L ++Y  YG  L+ YS++      + +      K A  IAG  +L S  
Sbjct: 119 NRTTVPLIDLMLVSVYFGYGAMLI-YSARHRQTSSLLW------KSAPFIAGLYVLISGA 171

Query: 182 IDSAMSLDFIYNQGRFSLYILTVGHVILIPVLAFAVIVVGVSTSSSDEVANLELTTSHEV 241
           ID  ++LD  +  G  +  I+TV H+I++ +L   ++      + +      EL+ +H+ 
Sbjct: 172 IDIVIALDIAFYSGNSAATIITVFHIIMLAILTLLIVTYSAQHTQT------ELSITHDQ 225

Query: 242 KETLTDEGMPEARAQ-EIVALFDRQMREKTHYLDPELTLSKLSRKLGIPAKQISAAVNQV 300
           K     E +P    + ++    D  +R    Y DP +TL +LSR++GIP +++S  +N+V
Sbjct: 226 KP----EALPATDDEHQLAKTLDDFIRTHALYTDPSMTLQRLSRRMGIPLRRLSETINRV 281

Query: 301 HQKNISKLINEYRIDHALWALTQSDDSITQIFMNSGFQTKSNFNREFSRVTGMTPSEYRK 360
           H +N S+++NEYRI+ A   L+Q+D  IT I + SGFQTKSNFNREF R+TGM+PS +R 
Sbjct: 282 HGRNFSQVMNEYRIEEAKRLLSQTDARITDIMLESGFQTKSNFNREFLRLTGMSPSVWRS 341

Query: 361 QH 362
           QH
Sbjct: 342 QH 343