Pairwise Alignments

Query, 365 a.a., AraC family transcriptional regulator from Vibrio cholerae E7946 ATCC 55056

Subject, 350 a.a., HTH-type transcriptional regulator CdhR from Azospirillum sp. SherDot2

 Score = 52.8 bits (125), Expect = 1e-11
 Identities = 32/122 (26%), Positives = 62/122 (50%), Gaps = 9/122 (7%)

Query: 247 DEGMPEAR-----AQEIVALFDRQMREKTHYLDPELT----LSKLSRKLGIPAKQISAAV 297
           D+  P+ +     A +  A+ D ++R  T  ++  L+    L +L++++ +  +Q     
Sbjct: 229 DQAQPQPQPLGPAAADPSAIADERIRRATLLMEQNLSVPLSLDELAQRVQVSTRQFIRLF 288

Query: 298 NQVHQKNISKLINEYRIDHALWALTQSDDSITQIFMNSGFQTKSNFNREFSRVTGMTPSE 357
                 +      + R+++A W LT SD+SITQI + +GF   ++ +R+F  V G+ PS 
Sbjct: 289 RMHTGASPLSYYRQLRLNYARWMLTHSDESITQIALEAGFSDCAHLSRQFRTVFGIPPSS 348

Query: 358 YR 359
            R
Sbjct: 349 LR 350