Pairwise Alignments

Query, 605 a.a., flavodoxin from Vibrio cholerae E7946 ATCC 55056

Subject, 369 a.a., predicted 2Fe-2S cluster-containing protein (NCBI) from Escherichia coli BW25113

 Score =  231 bits (589), Expect = 4e-65
 Identities = 122/269 (45%), Positives = 165/269 (61%), Gaps = 2/269 (0%)

Query: 6   LSQINVFPVKSLGGLALSSAWVEKQGLTFDRRFMLALSDGSMVTARKFPQMVLIKTALRH 65
           L ++ + PVKS+ G+ L+ A  +  GL FDR FM+   DG+ +TAR+FPQMV    +  H
Sbjct: 4   LIRLFIHPVKSMRGIGLTHALADVSGLAFDRIFMITEPDGTFITARQFPQMVRFTPSPVH 63

Query: 66  DGVLFSAQGHPSLTIRYADFKFQPVPAQVWSDNFTAYTTTDEADDWFSQVLGIRVELLYS 125
           DG+  +A    S  +R+ADF  Q  P +VW  +FTA    D  + W S      V+L + 
Sbjct: 64  DGLHLTAPDGSSAYVRFADFATQDAPTEVWGTHFTARIAPDAINKWLSGFFSREVQLRWV 123

Query: 126 GEQ-SNRVREKVGHNVSFADGYPLLVISQASLDELNRRSPEFHSMDQFRTNLVVSGTEPF 184
           G Q + RV+      +SFADGYP L+ ++ASL +L +R P    M+QFR NLVVSG   +
Sbjct: 124 GPQMTRRVKRHNTVPLSFADGYPYLLANEASLRDLQQRCPASVKMEQFRPNLVVSGASAW 183

Query: 185 AEDSWKRIRIGEVEFEAVKPCERCILTTVEVKKGAFRPTKEPLRTLSQFR-ANERGGVFF 243
            ED WK IRIG+V F+ VKPC RCI TTV  +KG   P  EPL+TL  FR A + G V F
Sbjct: 184 EEDRWKVIRIGDVVFDVVKPCSRCIFTTVSPEKGQKHPAGEPLKTLQSFRTAQDNGDVDF 243

Query: 244 GQNLVAKNEGMIRAGDPIEVLEYKEKEVY 272
           GQNL+A+N G+IR GD +E+L     ++Y
Sbjct: 244 GQNLIARNSGVIRVGDEVEILATAPAKIY 272



 Score = 60.8 bits (146), Expect = 9e-14
 Identities = 34/90 (37%), Positives = 47/90 (52%), Gaps = 4/90 (4%)

Query: 512 TLQVAPREKKAVTLSFNGIQVSADNQKTLLEHAEDAGVRIPNSCRAGICGACKVKVKSGL 571
           T  +  +    V + + G     +NQ+ LLE  E+ G+RIP SCRAGICG+C+V++  G 
Sbjct: 280 TANITQQPDANVDIDWQGQAFRGNNQQVLLEQLENQGIRIPYSCRAGICGSCRVQLLEGE 339

Query: 572 VEQPKVPALMDHERSMGMALACCSVANTDL 601
           V   K  A+ D     G  L C  V  T L
Sbjct: 340 VTPLKKSAMGDD----GTILCCSCVPKTAL 365