Pairwise Alignments

Query, 624 a.a., methyl-accepting chemotaxis protein from Vibrio cholerae E7946 ATCC 55056

Subject, 712 a.a., chemotaxis protein from Pseudomonas simiae WCS417

 Score =  280 bits (716), Expect = 2e-79
 Identities = 191/514 (37%), Positives = 288/514 (56%), Gaps = 34/514 (6%)

Query: 140 APYADSASGEILVSVATPVKDSATGQFLGSIFYDVSLAELAELVNEV--KLFD-AGYVFI 196
           APY    +  +L S   P+     G F G +  D+S+  + +++     KL++ AG + +
Sbjct: 204 APYKVGNAMVMLASFIEPIM--IDGAFQGIVGADLSVNFIQDMLTSADQKLYNGAGEMAL 261

Query: 197 VSEDGTTIAHPKKEFN-GKPMSEFL-------------GESKINVDT-HQVIINGKPYAV 241
           +S +G  +A+ K     G+  S+ L             GE + ++D  H  I    P+ +
Sbjct: 262 ISSNGRLVAYTKDASKLGEKASDLLDSNELTNLNQLKAGEVRYDIDKEHGHIELFLPFTI 321

Query: 242 SFSDVEGEDWYV-------GVVIDEEIAYAALDELRRSTLI-FTVIALVISVFVLLFIVR 293
             +D     W +        V+ D +   + L+  R++ +   T+  L+I+   LL I  
Sbjct: 322 GQADAR---WTLMLQLPLSAVMADSQKLQSDLEAQRKTDIFGMTIAGLLIAGIGLLVIWL 378

Query: 294 V---LMKPLDTLNDAIQNVASGEGDLTQRLSTNTDEEFAKLAIGFNTFTETLQKQLIQSK 350
           V   + +PL  +   + ++A GEGDLT+RL+++  +E   +A GFNTF   LQ  + Q  
Sbjct: 379 VGHGIARPLKQMVAMLNDIAQGEGDLTRRLTSDRADELGAIANGFNTFLIKLQGMITQVV 438

Query: 351 AIGAEILRGSESTSMTLQQSAEAMRSQLHELEQLATAMHEMATTSSDVANNAQGAASAAK 410
           +   ++   SE T+    ++ + +  Q+ E++Q+ATA+HEM  T+ DVA NA  AA AA 
Sbjct: 439 SSVQKVSDSSEHTADIAIRTNQGVHKQMVEIDQVATAVHEMTATAQDVARNATQAAQAAS 498

Query: 411 VADDAAAAGTDVVTKTTKAIDTLSATIDAAVDDVKVLESATANIETVLKVINDIADQTNL 470
            AD AA+ G  +V  T+ +I  L+  I  AV  V+ L   + NI  +L  I  IA+QTNL
Sbjct: 499 HADQAASQGMRIVRDTSTSIGALAEEIGKAVSVVQTLAKDSENINAILTAIRGIAEQTNL 558

Query: 471 LALNAAIEAARAGESGRGFAVVADEVRTLAQRTQQSTTEIRNMIEKLQSGANAVAVAMSH 530
           LALNAAIEAARAGE GRGFAVVADEVR LAQ+TQ++T EI+ MI++LQ G   V   M  
Sbjct: 559 LALNAAIEAARAGEQGRGFAVVADEVRNLAQKTQKATEEIQTMIQQLQQGTRDVVRVMED 618

Query: 531 SKDTAASAVNQAQGANEALEKIRLAIQQISDMNIQIASAAEEQSLVAEEINNNTVKIKDL 590
           S+     +V  A  A EALE I  A+  I+DMN QIASAAEEQS VAE+IN N + I  +
Sbjct: 619 SQSRTDESVQHAAKAAEALETITQAVSVINDMNTQIASAAEEQSAVAEDINRNVINIGQV 678

Query: 591 SDQVAESADEANMSMQIQTENIREQDAILNKFKV 624
           +++VA  ADE++ +    T+   +Q  ++N+FKV
Sbjct: 679 ANEVAGGADESSAASADLTKLAEQQRRLINQFKV 712