Pairwise Alignments

Query, 624 a.a., methyl-accepting chemotaxis protein from Vibrio cholerae E7946 ATCC 55056

Subject, 544 a.a., chemotaxis protein from Pseudomonas simiae WCS417

 Score =  233 bits (594), Expect = 2e-65
 Identities = 143/371 (38%), Positives = 222/371 (59%), Gaps = 2/371 (0%)

Query: 254 GVVIDEEIAYAALDELRRSTLIFTVIALVISVFVLLFIVRVLMKPLDTLNDAIQNVASGE 313
           GV +D+  A  +  ++ +++ I   IALV+++ V L I R +++PL    +A+ N+ASGE
Sbjct: 176 GVYVDDVQAEFS-SQVWKASFIGLAIALVMALLVSL-IARSIVRPLQAAVNAMGNIASGE 233

Query: 314 GDLTQRLSTNTDEEFAKLAIGFNTFTETLQKQLIQSKAIGAEILRGSESTSMTLQQSAEA 373
            DLT+ L T+  +E  +L+  FN+FT  L++ + Q +     + + S+       Q+ + 
Sbjct: 234 SDLTRSLDTHGQDEVTQLSRHFNSFTAKLRQVVGQLQVCANALGQSSQELGSNATQAHDR 293

Query: 374 MRSQLHELEQLATAMHEMATTSSDVANNAQGAASAAKVADDAAAAGTDVVTKTTKAIDTL 433
            + Q  ++E +ATA++E+     DVA NA+ AAS  + A   A  G   +  + + ID L
Sbjct: 294 SQQQSQQMELVATAINEVTYGVQDVAKNAEHAASEMRDAQAQAQQGQVNIDSSLQQIDQL 353

Query: 434 SATIDAAVDDVKVLESATANIETVLKVINDIADQTNLLALNAAIEAARAGESGRGFAVVA 493
           S TI  AV+ ++ L + +  I +VL+VI  IADQTNLLALNAAIEAARAGE GRGFAVVA
Sbjct: 354 SGTISQAVEVIRTLSAESTQIGSVLEVIRSIADQTNLLALNAAIEAARAGEQGRGFAVVA 413

Query: 494 DEVRTLAQRTQQSTTEIRNMIEKLQSGANAVAVAMSHSKDTAASAVNQAQGANEALEKIR 553
           DEVR LAQRTQ+ST EI+ MIE+LQ  + A    +S S   +   + QA  A  +L  I 
Sbjct: 414 DEVRLLAQRTQKSTAEIQGMIERLQGHSEAAVKVISDSHSASQMTIEQAGQAGASLTAIG 473

Query: 554 LAIQQISDMNIQIASAAEEQSLVAEEINNNTVKIKDLSDQVAESADEANMSMQIQTENIR 613
            +++ ++ +N  IASA  +Q+ V E+IN N  +   LS   A +A++++++         
Sbjct: 474 ESLRNLNGLNASIASATLQQAHVVEDINQNVTEAAGLSHSTALAAEQSSVASAHLRGLSE 533

Query: 614 EQDAILNKFKV 624
           + D +L +FKV
Sbjct: 534 QLDGLLRQFKV 544