Pairwise Alignments

Query, 624 a.a., methyl-accepting chemotaxis protein from Vibrio cholerae E7946 ATCC 55056

Subject, 639 a.a., methyl-accepting chemotaxis protein from Vibrio cholerae E7946 ATCC 55056

 Score =  312 bits (800), Expect = 2e-89
 Identities = 212/632 (33%), Positives = 347/632 (54%), Gaps = 19/632 (3%)

Query: 2   KFSHKIVAASSVLLLATVALLSGSQYFKVRDEIRSMVSDSVDEIVDGVSKTTAEVINGRK 61
           K    +V A +V   A VA  +G Q F+ +D  R++ S+S + +    +K   +   G++
Sbjct: 18  KMVFSVVVAIAVTAAALVA--AGYQTFE-KDSWRAIESESRNTL-QAHAKGIGDWFLGKQ 73

Query: 62  SIAQYATSLIENNPEPDNVRTIISQPLIKNTFLLVGFGLEKDGSNINNDPSWNPGPTWDP 121
              +     IE NP+ + V  +  Q L   +F L  +G E+ G     DPS N    +DP
Sbjct: 74  LALKGLREEIERNPQLELVPHL-RQTLQSGSFGLSYYGNEQ-GEMFRQDPSLNTAD-YDP 130

Query: 122 RVRPWYKDAKNAGKLVITAPYADSASGEILVSVATPVKDSATGQFLGSIFYDVSLAELAE 181
           RVR WYK+AK AGK + T PY       ++V++A PV+    GQ +G    +++L +L +
Sbjct: 131 RVRGWYKEAKAAGKPITTEPYVSVTMQTLVVTLAEPVRYQ--GQLIGVAASNLALDKLIK 188

Query: 182 LVNEVKLFDAGYVFIVSEDGTTIAHPKKEFNGKPMSEFLGE---SKINV-----DTHQVI 233
            V  +++   GY  +V++ G  +AHP ++   KP  E   +   SK+N+        Q+ 
Sbjct: 189 DVLAIEVPGKGYAILVNQKGKIVAHPTQDLILKPTEEMSAQLTISKLNIAAKDHSLFQLS 248

Query: 234 INGKPYAVSFSDVEGEDWYVGVVIDEEIAYAALDELRRSTL-IFTVIALVISVFVLLFIV 292
           ++G+   +   +V   DW + +V+D+ +    L+++    + I   I LV+++    F+ 
Sbjct: 249 MDGRDKVLMAEEVANTDWLLVMVMDKGVLEQPLNDMLMVQIGIGLGILLVMALLTSWFVA 308

Query: 293 RVLMKPLDTLNDAIQNVASGEGDLTQRLSTNTDEEFAKLAIGFNTFTETLQKQLIQSKAI 352
           R L + L  + +A+ ++A G+GDLT+RL   + +E   LA  FN F + L + +   + +
Sbjct: 309 RQLNE-LGNIANALADIAEGDGDLTRRLDVRSQDEVGLLADKFNKFVDRLHQMVKNVREV 367

Query: 353 GAEILRGSESTSMTLQQSAEAMRSQLHELEQLATAMHEMATTSSDVANNAQGAASAAKVA 412
              + +G++  + +  Q+++ +R+Q  E+  +ATA+ EMA+ ++++A+NA+  A  A  +
Sbjct: 368 SVALTQGADHAAASATQASKRIRTQQDEITMVATAVTEMASATAEIASNAENTAKNATQS 427

Query: 413 DDAAAAGTDVVTKTTKAIDTLSATIDAAVDDVKVLESATANIETVLKVINDIADQTNLLA 472
                 G   + ++ ++ID L+  +  AV  +  LE     I T+L  I  IA+QTNLLA
Sbjct: 428 VQLGEDGFAQMQQSKQSIDQLAQELTGAVRIISELEVHANEISTILSTIRGIAEQTNLLA 487

Query: 473 LNAAIEAARAGESGRGFAVVADEVRTLAQRTQQSTTEIRNMIEKLQSGANAVAVAMSHSK 532
           LNAAIEAARAGE GRGFAVVADEVR L+QRT  ST EI+  I  LQ         M+ S 
Sbjct: 488 LNAAIEAARAGEQGRGFAVVADEVRVLSQRTHASTEEIQTKIAGLQKVTTTAVSVMTESH 547

Query: 533 DTAASAVNQAQGANEALEKIRLAIQQISDMNIQIASAAEEQSLVAEEINNNTVKIKDLSD 592
               ++V        +L+ I  AIQQISDM  QIASAAEEQSLV  +IN NT  ++++SD
Sbjct: 548 KLVETSVADVNQTGASLQAISEAIQQISDMATQIASAAEEQSLVTADINVNTESVREVSD 607

Query: 593 QVAESADEANMSMQIQTENIREQDAILNKFKV 624
           Q+AE A ++    +      +E +  +++FK+
Sbjct: 608 QLAEEAQQSVQQAKSLHAMAQELNKEISRFKL 639