Pairwise Alignments

Query, 624 a.a., methyl-accepting chemotaxis protein from Vibrio cholerae E7946 ATCC 55056

Subject, 631 a.a., methyl-accepting chemotaxis protein from Vibrio cholerae E7946 ATCC 55056

 Score =  342 bits (877), Expect = 3e-98
 Identities = 222/636 (34%), Positives = 347/636 (54%), Gaps = 23/636 (3%)

Query: 1   MKFSHKIVAASSVLLLATVALLSGSQYFKVRDEIRSMVSDSVDEIVDGVSKTTAEVINGR 60
           +   HK++ AS   L A V + +   +F    +++   S++V    D +S T A+ I+  
Sbjct: 7   LTLKHKLIGAS---LSAVVVMATALTWFSA-SQLQQQTSNAVYTRADAISSTAAKGISDW 62

Query: 61  KSIAQYATSLIENNPEPDNVRTIISQPLIKNTFLLVGFGLEKDGSNINNDPSWNPGPTWD 120
            SI +  ++    + E  NV   + Q      F  + +G   DG+   + P  N    +D
Sbjct: 63  ISIRKSISTAFNAHIEAQNVVPYLQQARNAGGFDDIFYGTT-DGAMYRSHPERNRAD-YD 120

Query: 121 PRVRPWYKDAKNAGKLVITAPYADSASGEILVSVATPVKDSATGQFLGSIFYDVSLAELA 180
           PR RPWYKDA +AGK +IT  Y+D+ +G +LV++A PV+    G   G +  DV + +L 
Sbjct: 121 PRTRPWYKDAASAGKQIITTAYSDAITGALLVTIAEPVR--LNGNMSGVVGADVLIDQL- 177

Query: 181 ELVNEVKLFDAGY----VFIVSEDGTTIAHPKKEFNGKP---MSEFLGESKINVDTHQ-- 231
             + +V   DAG     + I  ++G+ +AHP K    KP   +S  L    I    +Q  
Sbjct: 178 --IADVISMDAGKNAQTMLIDGQNGSFLAHPDKSLLLKPVTTLSSALDMRTIERAANQGE 235

Query: 232 ---VIINGKPYAVSFSDVEGEDWYVGVVIDEEIAYAALDELRRSTLIFTVIALVISVFVL 288
              + +NG      F+ V    WY  V +D +  YA+  EL    +   ++  VI V ++
Sbjct: 236 LLALKLNGVEKFFFFTAVPDTPWYFAVQMDSDTEYASHSELLTGLITTALLITVIVVVIV 295

Query: 289 LFIVRVLMKPLDTLNDAIQNVASGEGDLTQRLSTNTDEEFAKLAIGFNTFTETLQKQLIQ 348
            ++V  L + L  ++ A++ +ASG+ DLTQRL   +D+E  +LA  FNTF   +   +++
Sbjct: 296 SWLVSFLFRDLGRVSKALEEIASGDADLTQRLEPRSDDEVGQLASNFNTFVSNMHTMVLK 355

Query: 349 SKAIGAEILRGSESTSMTLQQSAEAMRSQLHELEQLATAMHEMATTSSDVANNAQGAASA 408
              + A + + S+ T+   ++ +  +R Q  E+  +ATA++EMA  + ++A NA   A  
Sbjct: 356 LSHVSAALAQQSKVTAAQAEERSSRIRLQQDEINMVATAINEMAAATQEIAGNADHTAQN 415

Query: 409 AKVADDAAAAGTDVVTKTTKAIDTLSATIDAAVDDVKVLESATANIETVLKVINDIADQT 468
           A  A  A   G   VT+T ++I +L+  +  A + ++ LE+    I T+L  I +IA+QT
Sbjct: 416 AGEAVTACVHGAGQVTQTQRSIQSLAEEVQVATEVIQELEAHGHQISTILSTIQNIAEQT 475

Query: 469 NLLALNAAIEAARAGESGRGFAVVADEVRTLAQRTQQSTTEIRNMIEKLQSGANAVAVAM 528
           NLLALNAAIEAARAGE GRGFAVVADEVR L+QRT  ST EI+ MIE LQ+        M
Sbjct: 476 NLLALNAAIEAARAGEQGRGFAVVADEVRVLSQRTHASTKEIQQMIETLQATTGKAVGIM 535

Query: 529 SHSKDTAASAVNQAQGANEALEKIRLAIQQISDMNIQIASAAEEQSLVAEEINNNTVKIK 588
             S+  A ++V+ A  A+ +LE+I   +++ISDM  QIASAAEEQ+ V  EI  NTV I+
Sbjct: 536 DDSRRLADTSVDDANEASVSLEQIHKTVERISDMATQIASAAEEQASVTSEITRNTVGIR 595

Query: 589 DLSDQVAESADEANMSMQIQTENIREQDAILNKFKV 624
           D+S+ +A+ A  A       +E   E +  + +FK+
Sbjct: 596 DVSNDLAQEAHSAAEQAAELSELSHELEQEIRRFKL 631