Pairwise Alignments

Query, 624 a.a., methyl-accepting chemotaxis protein from Vibrio cholerae E7946 ATCC 55056

Subject, 643 a.a., Methyl-accepting chemotaxis protein PctB from Pseudomonas putida KT2440

 Score =  332 bits (852), Expect = 2e-95
 Identities = 207/605 (34%), Positives = 313/605 (51%), Gaps = 8/605 (1%)

Query: 1   MKFSHKIVAASSVLLLATVALLSGSQYFKVRDEIRSMVSDSVDEIVDGVSKTTAEVINGR 60
           +KF HKI+ ++  +++   AL +    +  R+ IR  +  SV +     + +    ++GR
Sbjct: 18  LKFRHKILLSACGVVVLAFALFTLYNDYLQRNTIRQNIEASVQQSGALTASSVQNWMSGR 77

Query: 61  KSIAQYATSLIENNPEPDNVRTIISQPLIKNTFLLVGFGLEKDGSNINNDPSWNPGPTWD 120
             + +     I      D +  +I QP     FL    G          D     G  +D
Sbjct: 78  ILVLENLAQDIGQQGAGDTLAGLIEQPSYTRNFLFTYLGQANGEFTQRPDAQMPAG--YD 135

Query: 121 PRVRPWYKDAKNAGKLVITAPYADSASGEILVSVATPVKDSATGQFLGSIFYDVSLAELA 180
           PR RPWY  A NAG+ V+TAPY   A G ++V++ATPVK    G+ +G +  DV+L  L 
Sbjct: 136 PRQRPWYGAAANAGQTVLTAPY-QGAVGGLMVTIATPVKSKRNGELIGVVGGDVTLDTLV 194

Query: 181 ELVNEVKLFDAGYVFIVSEDGTTIAHPKKEFNGKPMSEFLGESKINVDT--HQVIINGKP 238
           E++N V     G+ F+   +G  I  P K+   K + +    S + V      V ++G+ 
Sbjct: 195 EIINSVDFGGIGHAFLADANGQVIVSPNKDQVMKNLKDIYPGSNLRVAAGMQDVTLDGQD 254

Query: 239 YAVSFSDVEG---EDWYVGVVIDEEIAYAALDELRRSTLIFTVIALVISVFVLLFIVRVL 295
             +SF+ V G     WY+G+ ID + AYAAL + R S +I  +IA+     +L  ++ VL
Sbjct: 255 RIISFAPVAGLPSAQWYIGLSIDRDKAYAALSQFRTSAIIAMLIAVAAIAGLLGLLIPVL 314

Query: 296 MKPLDTLNDAIQNVASGEGDLTQRLSTNTDEEFAKLAIGFNTFTETLQKQLIQSKAIGAE 355
           M PL T+  A++++A GEGDLT+RL+    +EF +LA  FN F E +   + +  +    
Sbjct: 315 MSPLTTMGRAMRDIAEGEGDLTRRLAVQNKDEFGELATSFNRFVERIHASISEVSSATRL 374

Query: 356 ILRGSESTSMTLQQSAEAMRSQLHELEQLATAMHEMATTSSDVANNAQGAASAAKVADDA 415
           +   SE        S      Q      +A A++E+   + ++A NA  A+  A  A + 
Sbjct: 375 VHDLSEKVVSASNASIIGSEEQSMRTNSVAAAINELGAATQEIARNAADASQHASGASEQ 434

Query: 416 AAAGTDVVTKTTKAIDTLSATIDAAVDDVKVLESATANIETVLKVINDIADQTNLLALNA 475
           A  G +VV +   A+  LS  I  +   ++ L ++T  I  +L VI  I+ QTNLLALNA
Sbjct: 435 AHGGREVVEEAISAMTALSQRISESCAQIETLNASTDEIGKILDVIKGISQQTNLLALNA 494

Query: 476 AIEAARAGESGRGFAVVADEVRTLAQRTQQSTTEIRNMIEKLQSGANAVAVAMSHSKDTA 535
           AIEAARAGE+GRGFAVVADEVR LA RTQ+S  EI  MI  LQ G+      M+ S+ ++
Sbjct: 495 AIEAARAGEAGRGFAVVADEVRNLAHRTQESAEEIHRMITSLQVGSREAVHTMNTSQVSS 554

Query: 536 ASAVNQAQGANEALEKIRLAIQQISDMNIQIASAAEEQSLVAEEINNNTVKIKDLSDQVA 595
              V  A  A E L  +   I +I  MN  +A+A EEQ+ V E +N +  +I  L+ Q  
Sbjct: 555 EQTVQVANQAGERLASVTQRIGEIDGMNQSVATATEEQTAVVESLNLDITQINALNQQGV 614

Query: 596 ESADE 600
           E+ +E
Sbjct: 615 ENLNE 619