Pairwise Alignments

Query, 624 a.a., methyl-accepting chemotaxis protein from Vibrio cholerae E7946 ATCC 55056

Subject, 688 a.a., Methyl-accepting chemotaxis transducer from Pseudomonas putida KT2440

 Score =  285 bits (728), Expect = 6e-81
 Identities = 191/517 (36%), Positives = 290/517 (56%), Gaps = 32/517 (6%)

Query: 126 WYKDAKNAGKLVITAPYADSASGE--ILVSVATPVKDSATGQFLGSIFYDVSLAELAEL- 182
           W    ++  +  +  PY D  +G   ++ S+A P+ +   G+ +G +  D+ LA L +L 
Sbjct: 186 WLTCPQDTARTCMLEPYLDEVNGRQVLMTSIALPLLEH--GKVVGVVGLDIGLANLQQLS 243

Query: 183 VNEVK-LFDA-GYVFIVSEDGTTIAHPKKE-FNGKPMSEFLGESKINVDTHQVIINGKPY 239
           VN  + LFD  G V I +  G    + + +   GKPM + + +  + V            
Sbjct: 244 VNGRRDLFDGQGQVSIATAAGLLAGNSRDDSVLGKPMDKSVADGLLRV------------ 291

Query: 240 AVSFSDV-EGEDWYVGVVIDEEIAYAALDELRR--------STLIFTVIALVISVFVLLF 290
           A  F+ + +   W V + + E +  A    L +        + L   +I L  ++  LL 
Sbjct: 292 AHPFTPIPDTAPWQVVLELPESVLQAPAVALNQRLDAHNQNANLTSLLIGLGTAIAGLLL 351

Query: 291 I---VRVLMKPLDTLNDAIQNVASGEGDLTQRLSTNTDEEFAKLAIGFNTFTETLQKQLI 347
           +    R + +P+  +   ++++ASGEGDLT+RL     +E  +L   FN F + LQ  + 
Sbjct: 352 VWLTARGVTRPILAVAARLEDIASGEGDLTRRLDYAHQDELGQLTGWFNRFLDKLQPVIA 411

Query: 348 QSKAIGAEILRGSESTSMTLQQSAEAMRSQLHELEQLATAMHEMATTSSDVANNAQGAAS 407
           Q K    E    ++ ++    Q+++ M+ Q  E+EQ+ATA +EM+ T+ DVA+NA  AA 
Sbjct: 412 QVKGSLQEARNTADQSAAIASQTSDGMQQQHREIEQVATAANEMSATALDVAHNASQAAQ 471

Query: 408 AAKVADDAAAAGTDVVTKTTKAIDTLSATIDAAVDDVKVLESATANIETVLKVINDIADQ 467
           AA+ AD A+  G  +V  T + ID L+A ++ A+D+ + LE  +  I +VL+VI  IA+Q
Sbjct: 472 AARAADQASQEGLQLVDSTRQGIDRLAAGMNTAMDEARALEDRSGQIGSVLEVIRTIAEQ 531

Query: 468 TNLLALNAAIEAARAGESGRGFAVVADEVRTLAQRTQQSTTEIRNMIEKLQSGANAVAVA 527
           TNLLALNAAIEAARAGE+GRGFAVVADEVR LAQRTQ S  EIR +IE LQ G   V  A
Sbjct: 532 TNLLALNAAIEAARAGEAGRGFAVVADEVRGLAQRTQVSVEEIRQVIEGLQQGTQDVVGA 591

Query: 528 MSHSKDTAASAVNQAQGANEALEKIRLAIQQISDMNIQIASAAEEQSLVAEEINNNTVKI 587
           M   +  A  +  + + A  AL++I  A+  ISDMN+QIASAAEEQS VAEE+N N   I
Sbjct: 592 MHAGQRQAQDSAARMEQALPALQRIGEAVAVISDMNLQIASAAEEQSAVAEEVNRNVAGI 651

Query: 588 KDLSDQVAESADEANMSMQIQTENIREQDAILNKFKV 624
           +D+++ +A  ADE+    Q       +Q A++ +F+V
Sbjct: 652 RDVTESLAGQADESARISQALNRLANQQQALMEQFRV 688