Pairwise Alignments

Query, 624 a.a., methyl-accepting chemotaxis protein from Vibrio cholerae E7946 ATCC 55056

Subject, 647 a.a., Methyl-accepting chemotaxis transducer from Pseudomonas putida KT2440

 Score =  266 bits (680), Expect = 2e-75
 Identities = 178/534 (33%), Positives = 281/534 (52%), Gaps = 20/534 (3%)

Query: 104 GSNINNDPSWNPGP---TWDPRVRPWYKDAK-NAGKLVITAPYADSASGEILVSVATPVK 159
           G N      W  G     +DPR RPWY+ A  N GK + T  Y  +A   +LVS    V 
Sbjct: 119 GVNDGGYTGWPAGQKFVNYDPRTRPWYQLAMANPGKTMRTGAYYWAADDAVLVSTVRTVA 178

Query: 160 DSATGQFLGSIFYDVSLAELAELVNEVKLFDAGYVFIVSEDGTTIAHPKKE-FNGKPMSE 218
           +   G   G +  DVSL  L E+V ++KL ++GY+ +V  +G  +  P+    N K +  
Sbjct: 179 NQL-GNPGGVVNIDVSLKGLTEIVKQIKLGESGYLMLVESNGNVMVDPRDATHNFKQLGS 237

Query: 219 FLGE-----SKINVDTHQVIINGKPYAVSFSDVEGEDW-YVGVVIDEEIAYAALDELRRS 272
           F G+     +K      +V +NG  Y  +    +   W ++G++   E+    +    R 
Sbjct: 238 F-GDGYAKLAKAGKGLVEVELNGVHYMANVYPDQQLGWTFIGLIEQSEV----MQTTTRL 292

Query: 273 TLIFTVIALVISVFVLLF---IVRVLMKPLDTLNDAIQNVASGEGDLTQRLSTNTDEEFA 329
           T +  VIA+V++    +      +++++P++++ + ++++A GEGDLT+ L     +E A
Sbjct: 293 TWLIGVIAVVLAALFAVVGAAFAKLIVRPINSVTNGLEDIAQGEGDLTRNLEIRGRDETA 352

Query: 330 KLAIGFNTFTETLQKQLIQSKAIGAEILRGSESTSMTLQQSAEAMRSQLHELEQLATAMH 389
           +LA  FN F   ++  +       ++IL  S S++      AEA   Q   ++ ++TA H
Sbjct: 353 QLANWFNQFLGAIRSLIQHIGTAASKILSTSSSSTRVSSDMAEAAGRQREAVDMVSTAFH 412

Query: 390 EMATTSSDVANNAQGAASAAKVADDAAAAGTDVVTKTTKAIDTLSATIDAAVDDVKVLES 449
           EM  T+++VA +   AA +A      A  G   +     ++D LS  I+ +   ++ LE 
Sbjct: 413 EMVATANEVARSCSQAAQSADSGQQQAREGQQQIDAAVHSVDRLSHEIEQSAQSIQQLER 472

Query: 450 ATANIETVLKVINDIADQTNLLALNAAIEAARAGESGRGFAVVADEVRTLAQRTQQSTTE 509
            +  I+++L  I  IA+QTNLLALNAAIEAARAGE GRGFAVVADEVR LA+RT  ST E
Sbjct: 473 DSNAIQSILGTIRSIAEQTNLLALNAAIEAARAGEQGRGFAVVADEVRALAKRTADSTAE 532

Query: 510 IRNMIEKLQSGANAVAVAMSHSKDTAASAVNQAQGANEALEKIRLAIQQISDMNIQIASA 569
           I  ++  L S    VA  M  S + +  +V++   A ++  +IR ++  I DMN QIA+A
Sbjct: 533 IDGLLGNLASRTAEVAEQMHASLEVSQQSVSRIGLARDSFGQIRESVDVIRDMNTQIATA 592

Query: 570 AEEQSLVAEEINNNTVKIKDLSDQVAESADEANMSMQIQTENIREQDAILNKFK 623
           AEEQ  VAE+IN +  +I   +  VAE A  A    +       E D ++ +F+
Sbjct: 593 AEEQHQVAEDINRHISQIHGDAQLVAELAQAARQDSESLAGLSNELDTLVRRFR 646