Pairwise Alignments

Query, 343 a.a., iron ABC transporter permease from Vibrio cholerae E7946 ATCC 55056

Subject, 345 a.a., ABC transporter permease from Pseudomonas simiae WCS417

 Score =  310 bits (794), Expect = 3e-89
 Identities = 176/333 (52%), Positives = 229/333 (68%), Gaps = 13/333 (3%)

Query: 14  LTLAVFFAGLYSITVGPMNITISDSIQSLL------FRSEQLTNAIHLVIHDIRLPRTLL 67
           L L    A   S+ +GP+++ + D++++ L        ++ L  A  L++  IRLPRTLL
Sbjct: 14  LALLCVLAIWLSLALGPVSLPLLDTLKAALRLMGLPIEAQGLEQA-ELILGQIRLPRTLL 72

Query: 68  CLLVGAILALCGTAMQGLFRNPLAEPGIIGVSSGASLGAALAIVLLSDVVSSLPWVNSLV 127
            L VG +LAL G AMQGLFRNPLA+PG++GVSSGA+LGAA+AIV  S            +
Sbjct: 73  GLAVGGVLALSGVAMQGLFRNPLADPGLVGVSSGAALGAAVAIVGGSFFGGLPDAFGPYL 132

Query: 128 LPIAAFIGGALTTVLVYRLGTSKFGTSVTIMLLAGVAISALAGAGIGYLNYLASDQMLRD 187
           L   AF+GG   T LVYRLG     T+V  MLLAG+A++ALA + +G   YLA D  LR 
Sbjct: 133 LSFCAFLGGLGVTALVYRLGRRNGQTNVATMLLAGIALTALASSAVGLFTYLADDATLRT 192

Query: 188 LTLWSMGSVAGATTSSI---LLCSVTLIMLFAYFHWRSMALNALLLGEAEARHLGVPVQK 244
           LT W++GS+ GA+ S +   LL S  + M   +   R+ ALNALLLGE+EA HLG+ V+ 
Sbjct: 193 LTFWNLGSLNGASYSRLWPLLLVSAGVAM---WLPRRAKALNALLLGESEANHLGIDVEG 249

Query: 245 LKREMILLSAVGVGVAVSAAGMIGFVGLVVPHIGRMLVGPDHRNLVPVSTLLGALMLTLA 304
           LKRE++  +A+GVG AV+AAGMIGFVGLVVPH+ R+L GPDHR L+P S L GA +L  A
Sbjct: 250 LKRELVFCTALGVGAAVAAAGMIGFVGLVVPHLVRLLAGPDHRVLLPASVLAGASLLLFA 309

Query: 305 DMVARVAVAPAELPIGIVTALVGAPFFLYLLFQ 337
           D+VAR+A+APAELPIGIVTA +GAPFFLYLL +
Sbjct: 310 DLVARLALAPAELPIGIVTAFIGAPFFLYLLLR 342