Pairwise Alignments

Query, 343 a.a., iron ABC transporter permease from Vibrio cholerae E7946 ATCC 55056

Subject, 329 a.a., iron ABC transporter from Pseudomonas simiae WCS417

 Score =  190 bits (482), Expect = 5e-53
 Identities = 122/328 (37%), Positives = 186/328 (56%), Gaps = 11/328 (3%)

Query: 8   AVTISCLTLAVFFAGLYSITVGPMNITISDSIQSLLFRSEQLTNAIHLVIHDIRLPRTLL 67
           A  I  L   +F+  LYS +  P  IT +D+   L+ +     N  ++V   +R+PR L 
Sbjct: 7   AAGIVLLGAGLFWLSLYSWS--PFTITATDAWNGLVHQGRVGGNMAYIVAQ-LRVPRALC 63

Query: 68  CLLVGAILALCGTAMQGLFRNPLAEPGIIGVSSGASLGAALAIVLLSDVVSSLPWVNSLV 127
             LVGA L L G  MQG+ RN LA P + GV++GA+LG AL     S  + +LP+    +
Sbjct: 64  AALVGACLGLAGALMQGITRNRLASPSLFGVTAGAALGLAL----FSTGLVALPFAGGAL 119

Query: 128 LPIAAFIGGALTTVLVYRLGTSKFGTSVT-IMLLAGVAISALAGAGIGYLNYLASDQMLR 186
           L     +GGAL  + V+ LG +   T+    ++LAGVA++AL  A +  L  +  +   +
Sbjct: 120 LMTC--LGGALAWITVFSLGGAWSPTTAQGRLVLAGVAVAALCAA-LTRLTVILVEAQAQ 176

Query: 187 DLTLWSMGSVAGATTSSILLCSVTLIMLFAYFHWRSMALNALLLGEAEARHLGVPVQKLK 246
            +  W  GS+A A  + + L     ++   +  W +  LN + LGE  AR LGV +  L+
Sbjct: 177 SVLNWLAGSLANAGAAQVQLLWPCTLIGGLWALWCAPRLNLINLGEDAARSLGVGIASLR 236

Query: 247 REMILLSAVGVGVAVSAAGMIGFVGLVVPHIGRMLVGPDHRNLVPVSTLLGALMLTLADM 306
            ++ + S + VG +V A G IGFVGL+ P+I R  +G D+R L+P+S  LGA+++  AD+
Sbjct: 237 LQVFIASLLLVGASVCAVGPIGFVGLIAPNILRQFLGNDYRWLIPLSAALGAVIVLAADL 296

Query: 307 VARVAVAPAELPIGIVTALVGAPFFLYL 334
           ++R    P E P G+VTAL+GAPFFL+L
Sbjct: 297 LSRAVAFPVETPAGVVTALIGAPFFLFL 324