Pairwise Alignments

Query, 343 a.a., iron ABC transporter permease from Vibrio cholerae E7946 ATCC 55056

Subject, 335 a.a., vitamin B12 ABC transporter permease BtuC from Vibrio cholerae E7946 ATCC 55056

 Score =  199 bits (505), Expect = 1e-55
 Identities = 114/280 (40%), Positives = 176/280 (62%), Gaps = 8/280 (2%)

Query: 56  VIHDIRLPRTLLCLLVGAILALCGTAMQGLFRNPLAEPGIIGVSSGASLGAALAIVLLSD 115
           ++ ++RLPR L   ++GA LA+ G  +Q L  N LAEPG++GVS GAS+  A+ I+LL  
Sbjct: 57  LVWELRLPRLLAAAVIGASLAVAGATLQVLLGNVLAEPGVVGVSGGASV--AMVILLLF- 113

Query: 116 VVSSLPWVNSLVLPIAAFIGGALTTVLVYRLGTSKFGTSVTIMLLAGVAISALAGAGIGY 175
                P +NS V  +AA + GAL   L+  +   K   +   +LL GVA+  L+GA + +
Sbjct: 114 ----FPSLNSPVAFMAAAVLGALLFTLLLVVMARKLRLTTARLLLVGVALGILSGAVVTW 169

Query: 176 LNYLASDQMLRDLTLWSMGSVAGATTSSILLCSVTLIMLFAYFHWRSMALNALLLGEAEA 235
             Y + D  LR L  W MGSVAG +    LL S+  + +  +   +   L+ L+LGE  A
Sbjct: 170 AFYFSDDLGLRQLMYWLMGSVAGVSWYQHLL-SLVAVPVVIWLVLQGGVLDKLMLGEGHA 228

Query: 236 RHLGVPVQKLKREMILLSAVGVGVAVSAAGMIGFVGLVVPHIGRMLVGPDHRNLVPVSTL 295
           + LG+ + +++  +IL  A+ VG +V+  G+IGFVGLVVPH+ R+ +G ++R L+P+S L
Sbjct: 229 KQLGIDIHRVRWRLILAIALLVGASVALGGVIGFVGLVVPHLLRLTLGSENRLLLPLSAL 288

Query: 296 LGALMLTLADMVARVAVAPAELPIGIVTALVGAPFFLYLL 335
            GAL+L  AD++AR+A+   ELP+G+VT  +GAP F+++L
Sbjct: 289 CGALLLVSADLIARLALGSGELPLGVVTTTLGAPIFIWML 328