Pairwise Alignments

Query, 343 a.a., iron ABC transporter permease from Vibrio cholerae E7946 ATCC 55056

Subject, 327 a.a., Iron(III) dicitrate transport system permease protein FecD (TC 3.A.1.14.1) from Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868

 Score =  195 bits (496), Expect = 1e-54
 Identities = 117/329 (35%), Positives = 192/329 (58%), Gaps = 5/329 (1%)

Query: 14  LTLAVFFAGLYSITVGPMNITISDSIQSLLFRSEQLTNAIHLVIHDIRLPRTLLCLLVGA 73
           + LA+  + +  +T G   + +S ++   LF+ E++   IH+++ DIRLP  L+ LLVG 
Sbjct: 4   IALAMMASLMVDVTCGSSGLPLS-ALWQALFQPEKVNAGIHVIVWDIRLPYALMALLVGM 62

Query: 74  ILALCGTAMQGLFRNPLAEPGIIGVSSGASLGAALAIVLLSDVVSSLPWVNSLVLPIAAF 133
            L L G  MQ +  NPLA P  +GVSS A+ GAALAIVL    +  +P   +  +P  AF
Sbjct: 63  ALGLAGAEMQTILNNPLATPFTLGVSSAAAFGAALAIVL-GIGIPGIP--AAWFIPANAF 119

Query: 134 IGGALTTVLVYRLGTSKFGTSVTIMLLAGVAISALAGAGIGYLNYLASDQMLRDLTLWSM 193
           I   L+ +L+  + T   G + + ++L G+A+     A +  + ++A +  L+ L  W+M
Sbjct: 120 IFALLSALLLDGI-TRWTGVAASGVVLFGIALVFTFNALVAIMQFVADEDTLQGLVFWTM 178

Query: 194 GSVAGATTSSILLCSVTLIMLFAYFHWRSMALNALLLGEAEARHLGVPVQKLKREMILLS 253
           GS+  A+   + + +V  I +       +  L AL LGE  A   G+ V++L+   +L  
Sbjct: 179 GSLVRASWEKLGVLAVVFIAVLFCALRSAWQLTALRLGEERAMSFGIHVRRLRLLSLLRI 238

Query: 254 AVGVGVAVSAAGMIGFVGLVVPHIGRMLVGPDHRNLVPVSTLLGALMLTLADMVARVAVA 313
           ++   +AV+  G IGF+GLV PHI R+L+G DHR  +P S L+G L+L+LA + A+ ++ 
Sbjct: 239 SLLSALAVAFVGPIGFIGLVAPHIARILLGEDHRFYLPGSVLIGGLVLSLASIAAKNSIP 298

Query: 314 PAELPIGIVTALVGAPFFLYLLFQQKGRI 342
              +P+GIVT+LVG PFFL ++ + +G +
Sbjct: 299 GVMVPVGIVTSLVGVPFFLSIVLRHRGSL 327