Pairwise Alignments

Query, 343 a.a., iron ABC transporter permease from Vibrio cholerae E7946 ATCC 55056

Subject, 358 a.a., Fe(3+)-siderophore ABC transporter permease from Dickeya dianthicola ME23

 Score =  154 bits (389), Expect = 3e-42
 Identities = 112/292 (38%), Positives = 160/292 (54%), Gaps = 24/292 (8%)

Query: 56  VIHDIRLPRTLLCLLVGAILALCGTAMQGLFRNPLAEPGIIGVSSGASLGAALAIVLLSD 115
           +I   RLPRTL  +LVG  L   G  MQ L RNPLA+PGI+GV++GAS    L I     
Sbjct: 82  IILQARLPRTLAGMLVGMALGAAGAVMQALTRNPLADPGILGVNAGASFAIVLGISFFG- 140

Query: 116 VVSSLPWVNSLVLPIAAFIGGALTTVLVYRLGTSKFGTSVTIML-LAGVAISALAG---A 171
           +     W+        A++G     ++V+ +GT   G    I L LAGVA+SA+     +
Sbjct: 141 ITGMASWLGF------AWLGVLAAGLMVWIIGTLSGGRVNPIRLTLAGVALSAVLSGFTS 194

Query: 172 GIGYLNYLASDQM----LRDLTLWSMGSVAGATTSSILLCSVTLIMLFAYFHWRSMALNA 227
            +  LN LA DQ+       L + S+G+VA  T + +L C++      A+F  RS  LN 
Sbjct: 195 SLTLLNPLAFDQLRLWEAGTLDIRSLGNVAWVTPTVLLGCAL------AFFAARS--LNT 246

Query: 228 LLLGEAEARHLGVPVQKLKREMILLSAVGVGVAVSAAGMIGFVGLVVPHIGRMLVGPDHR 287
           L +GE  A  LG  V  ++   +L   +  G A + AG IGFVGL++PHI R   GPD R
Sbjct: 247 LSMGEDLATALGTHVMLIRVIAMLAVMLLCGSATALAGPIGFVGLMIPHIARGWAGPDQR 306

Query: 288 NLVPVSTLLGALMLTLADMVARVAVAPAELPIGIVTALVGAPFFLYLLFQQK 339
            ++  S L   ++L  AD++ R+ V P EL + IVTA +GAP  ++L+ Q+K
Sbjct: 307 WILIYSLLFAPILLLGADIIGRLLV-PGELRVSIVTAFIGAPVLIWLVRQRK 357