Pairwise Alignments

Query, 343 a.a., iron ABC transporter permease from Vibrio cholerae E7946 ATCC 55056

Subject, 325 a.a., Hemin transport system permease protein HmuU from Alteromonas macleodii MIT1002

 Score =  187 bits (474), Expect = 4e-52
 Identities = 123/338 (36%), Positives = 189/338 (55%), Gaps = 25/338 (7%)

Query: 8   AVTISCLTLAVFFAGLYSITVGPMNITISDSIQSLLFRSEQLTNAIHLVIHDIRLPRTLL 67
           AVT+  +T+      L S+ +G + I     +       +Q     H+++  +++P  L 
Sbjct: 8   AVTLVVITV------LLSLVIGVVGIVGVTGLSDTAAELKQ-----HIIVQ-LQIPLILT 55

Query: 68  CLLVGAILALCGTAMQGLFRNPLAEPGIIGVSSGASLGAALAIVLLSDVVSSLPWVNSLV 127
             LVGA L+  G  +Q + RNPLA+PGIIG++SGASL AAL ++L         W  + +
Sbjct: 56  ACLVGAALSTSGATLQVVLRNPLADPGIIGITSGASLVAALLLLLTPQ------WATAYL 109

Query: 128 ---LPIAAFIGGALTTVLVYRLGTSKFGTSVTIMLLAGVAISALAGAGIGYLNYLASDQM 184
              LP+  FIG  L+T ++YRL     G+S T ++LAG+AIS L+GA I +L   +    
Sbjct: 110 HYLLPLGCFIGALLSTFIIYRLARKLLGSS-TAVILAGIAISTLSGAIIAWLYMFSDANA 168

Query: 185 LRDLTLWSMGSVAGATTSSILLCSVTLIMLFAYFHWRSMALNALLLGEAEARHLGVPVQK 244
           LR+LT W MGS+       + +    +    A   + +  LN L  GE  A+  GV V+K
Sbjct: 169 LRNLTFWLMGSLYQTNWLILSVGGPLIAFAVALQLYFAGDLNKLYAGELAAKSSGVDVEK 228

Query: 245 LKREMILLSAVGVGVAVSAAGMIGFVGLVVPHIGRMLVGPDHRNLVPVSTLLGALMLTLA 304
           L    +++ A+ VG AVS AG I FVGL+VPHI R+++G ++R L+P+S L GA +L L 
Sbjct: 229 LTERALIVCAIAVGTAVSMAGSIAFVGLLVPHILRLIIGHNNRYLLPLSALSGASLLMLV 288

Query: 305 DMVARVAVAPAELPIGIVTALVGAPFFLYLLFQQKGRI 342
            + + +  A   LP+ +VTA +G P  ++ L   KG+I
Sbjct: 289 ALSSEMTRA-ITLPVSMVTATLGGPLLIWAL--AKGQI 323