Pairwise Alignments

Query, 228 a.a., biopolymer transporter exbB1 from Vibrio cholerae E7946 ATCC 55056

Subject, 244 a.a., membrane spanning protein in TonB-ExbB-ExbD complex from Escherichia coli BL21

 Score = 52.8 bits (125), Expect = 6e-12
 Identities = 30/69 (43%), Positives = 40/69 (57%), Gaps = 1/69 (1%)

Query: 108 QFNSGLRLLTLIGVISPLLGLLGTVLGLIEMFKGVAATTGSITPNVLADGLGVAMYTTAA 167
           Q   G   L  IG ISP +GL GTV G++  F G+A T  +    V+A G+  A+  TA 
Sbjct: 125 QMGRGNGYLATIGAISPFVGLFGTVWGIMNSFIGIAQTQ-TTNLAVVAPGIAEALLATAI 183

Query: 168 GLLIAVPAV 176
           GL+ A+PAV
Sbjct: 184 GLVAAIPAV 192