Pairwise Alignments

Query, 228 a.a., biopolymer transporter exbB1 from Vibrio cholerae E7946 ATCC 55056

Subject, 454 a.a., Biopolymer transport protein ExbB from Alteromonas macleodii MIT1002

 Score = 56.6 bits (135), Expect = 8e-13
 Identities = 46/173 (26%), Positives = 82/173 (47%), Gaps = 21/173 (12%)

Query: 3   SLQQLQQQLGLMAWPLFICSALTVMLLAERLFQV-LLSLTVGKGAIRHALQATSPKNPKQ 61
           +LQ+  +Q G++ + + I  A  ++L  ERL  + L+ + V K      +   +P   + 
Sbjct: 268 NLQERVEQGGVVGYIILIVGAFGLLLALERLVTLTLIRMKVNKQLKSKEVNTNNPLG-RV 326

Query: 62  LAELTEHFASKRPVLYRGVAMLLAHHQFDKSLREDAAGIWLQEQRHQFNSGLRLLTLIGV 121
           L    EH  +    L             +  L E   G     +  +    L ++ +I V
Sbjct: 327 LKVRDEHPDADVEAL-------------ELHLTEAILG-----EVPKLGRNLTIIKIISV 368

Query: 122 ISPLLGLLGTVLGLIEMFKGVAATTGSITPNVLADGLGVAMYTTAAGLLIAVP 174
           ++PL+GLLGTV G+I  F+ +    G+  P ++A G+  A+ TT  GL++A+P
Sbjct: 369 VAPLMGLLGTVTGMINTFQAITLF-GTGDPKLMAGGISTALVTTVLGLVVAIP 420