Pairwise Alignments

Query, 455 a.a., heme anaerobic degradation radical SAM methyltransferase ChuW/HutW from Vibrio cholerae E7946 ATCC 55056

Subject, 425 a.a., Radical SAM family enzyme, similar to coproporphyrinogen III oxidase, oxygen-independent, clustered with nucleoside-triphosphatase RdgB from Hydrogenophaga sp. GW460-11-11-14-LB1

 Score =  103 bits (257), Expect = 1e-26
 Identities = 81/274 (29%), Positives = 120/274 (43%), Gaps = 18/274 (6%)

Query: 66  LYIHVPFCRVRCTFCNFFQNAASRQLVD-------AYFAALLEEIKQKAALPWTQTGVFH 118
           LYIH+P+C  +C +C+F  +  S            AY  AL  ++     L W +T   H
Sbjct: 48  LYIHLPWCLKKCPYCDFNSHEWSATAAPGEALPETAYLEALRADLAASLPLIWGRT--VH 105

Query: 119 AVYIGGGTPTELSPEQIRQLGTAIRESFPLTPDCEITLEGRIHRFSDEMFENALEGGFNR 178
           +V+IGGGTP+  SP  I +L   +R    L  D EITLE     F  + F    + G  R
Sbjct: 106 SVFIGGGTPSLFSPAAIDRLLGDVRAMLRLEADAEITLEANPGTFEKDRFRAFRDAGVTR 165

Query: 179 FSFGVQSFNTQVRRRAKRLDDREVVMERIASLAATQQAPIVIDLLYGLPYQTAQVFEQDL 238
            S GVQSFN    +   R+ DR   +  +   AA       +DL+Y LP QT    E D+
Sbjct: 166 LSIGVQSFNDAHLKALGRVHDRAQALAAVEE-AAQAFDTFNLDLMYALPGQTLADCEADV 224

Query: 239 QDFMQTGAQGIDLYQLVVGGSAPMLNLVEKGKLPPPATTPDKA-SLYQIGVEFMAKHHLR 297
           +  +      I +Y L +  +          K PP     D+A  +     E  A+  +R
Sbjct: 225 RTALSFAPPHISIYHLTLEPNTYF------AKYPPALPPEDEAWDMLDRITELTAEAGMR 278

Query: 298 PLSVNHWTRDNRERSLYNSLAKTYAEVLPIGCGA 331
              V+ + R+  +   +N     + + L IG GA
Sbjct: 279 RYEVSAYAREGHQ-CWHNLNYWQFGDYLGIGAGA 311