Pairwise Alignments

Query, 578 a.a., methyl-accepting chemotaxis protein from Vibrio cholerae E7946 ATCC 55056

Subject, 676 a.a., chemotaxis protein from Pseudomonas simiae WCS417

 Score =  190 bits (483), Expect = 1e-52
 Identities = 130/389 (33%), Positives = 206/389 (52%), Gaps = 14/389 (3%)

Query: 186 EEYHREKAKIMAPIDRFFQELETRTAQQFNQAAEQVKSTVLIGNISLVVVAIIAIIGYVV 245
           ++++   +++MA   +      T   QQ  Q   Q ++ +++   +L  V ++    Y  
Sbjct: 285 QDFYDGVSRLMAQTYQLDDATLTFLGQQLEQRLAQNRTHMVVLVSALSAVFLLIFYLYAG 344

Query: 246 VNRKIVTPIDRMASVLQRADDNSDLTLRVEEKSDDELAVIGRTINKVLGSYGSTISKINQ 305
                 T + R+ +++ +     D+T+    +S DEL  +G+  N   G+       I +
Sbjct: 345 FYASTRTTLRRLGAMMDKVAAG-DMTVTFVAQSRDELGDLGQVFN---GTVAKIHDLIER 400

Query: 306 VNHTISSI---SDTIRSITDQNMKMSSQQDQELEMAATAMEEMTSALSSVSQSTNMAEEY 362
           V HT+S +   +  + +++ Q+ +  S Q  ++E  ATAM +M+S    V++S   A   
Sbjct: 401 VGHTVSQVELQAGQVETVSAQSNQAVSGQRMQIEQVATAMNQMSSTAQEVARSAAAAVSS 460

Query: 363 AGSAEKEANNSKQVFEKTIREFADLDGEFQKTSEIIQQLATESNNVGNVLDVIKAIAEQT 422
           A S   E  + + + +      A L  E  ++ ++I QLAT+S ++ +VL+VIK+IAEQT
Sbjct: 461 AHSVNDETVSGRSLVQSQQGSIARLATEIDQSVQVINQLATDSQSISSVLEVIKSIAEQT 520

Query: 423 NLLALNAAIEAARAGEQGRGFAVVADEVRSLAQRTQESTGEIETMISMLQEKAEMSTKTI 482
           NLLALNAAIEAARAGEQGRGFAVVADEVR+LA+RTQ ST EIE MIS LQ     + K +
Sbjct: 521 NLLALNAAIEAARAGEQGRGFAVVADEVRTLARRTQHSTEEIEQMISRLQSGVAAAVKAM 580

Query: 483 RVSADKMQSTRGNMGVANESLVAIQGSAKEIHKLNTSIAAATEEQLTVSDEISSNLSTIK 542
             S D    T G      ++L  I G+   I   N  IAAA E+Q  V+ +I  N+  I 
Sbjct: 581 GSSHDMASGTVGQSERVQQALENILGAVGMIVDQNQQIAAAVEQQTAVAHDIDQNIVEIN 640

Query: 543 TL-------SGEMNLAIKQLGPVVVDLQR 564
                    + +   A +QL   V++L++
Sbjct: 641 RAGEHAAEGAYQTEAASRQLSLQVIELKQ 669