Pairwise Alignments

Query, 578 a.a., methyl-accepting chemotaxis protein from Vibrio cholerae E7946 ATCC 55056

Subject, 639 a.a., chemotaxis protein from Pseudomonas simiae WCS417

 Score =  206 bits (525), Expect = 2e-57
 Identities = 144/449 (32%), Positives = 230/449 (51%), Gaps = 16/449 (3%)

Query: 130 DREFALLKEAQNNSDALVNMEVKAMNAVKGLFPDASGNYTVKGEPDVNMAVQLLHSEEYH 189
           ++  A LK+      A     + A+    G +  A  NY       V    ++       
Sbjct: 205 EKAIAGLKDLNATFGASQQSALTALETALGAYRSAVQNYKAANANIVTARAEMT------ 258

Query: 190 REKAKIMAPIDRFFQ-ELETRTAQQFNQAAEQVKSTVLIGNISLVVVAIIAIIGYVVVNR 248
            + A I+   D+ ++ +L  R A+     + Q +S  LI  +  ++V +IA +   V+ R
Sbjct: 259 TQGADIVTISDKLYEIQLTRRDAE-----SAQARSLQLISTLLALLVGVIAAL---VITR 310

Query: 249 KIVTPIDRMASVLQRADDNSDLTLRVEEKSDDELAVIGRTINKVLGSYGSTISKINQVNH 308
           +I  PI    +V++R   + DL+  ++    DEL V+ + I ++  +    IS I     
Sbjct: 311 QITRPIQETLAVVERIA-SGDLSHNIQVTRRDELGVLQQGIQRMGTTLRELISGIRDGVT 369

Query: 309 TISSISDTIRSITDQNMKMSSQQDQELEMAATAMEEMTSALSSVSQSTNMAEEYAGSAEK 368
            I+S ++ + ++T+Q     + Q  E +  ATAM EMT+ +  V+++   A   A  A+ 
Sbjct: 370 QIASAAEELSAVTEQTSAGVNSQKIETDQVATAMHEMTATVQEVARNAEQASLAAADADG 429

Query: 369 EANNSKQVFEKTIREFADLDGEFQKTSEIIQQLATESNNVGNVLDVIKAIAEQTNLLALN 428
           +A    +V  + I +   L  E  ++++ +  L  ESN +G+V+DVIKA+AEQTNLLALN
Sbjct: 430 QARAGDKVVAEAIAQIERLAAEVARSTDAMTHLQQESNKIGSVMDVIKAVAEQTNLLALN 489

Query: 429 AAIEAARAGEQGRGFAVVADEVRSLAQRTQESTGEIETMISMLQEKAEMSTKTIRVSADK 488
           AAIEAARAGE GRGFAVVADEVR LAQRTQ+ST EIE +++ LQ   +     +  S   
Sbjct: 490 AAIEAARAGEAGRGFAVVADEVRGLAQRTQKSTEEIEGLVAGLQNGTQQVANVMNNSRSL 549

Query: 489 MQSTRGNMGVANESLVAIQGSAKEIHKLNTSIAAATEEQLTVSDEISSNLSTIKTLSGEM 548
             S+      A  SL  I  +   I  +N  IAAA E+Q  V++EIS ++  ++ +S + 
Sbjct: 550 TDSSVELTRKAGVSLENITRTVSNIQSMNQQIAAAAEQQSAVAEEISRSIVNVRDVSEQT 609

Query: 549 NLAIKQLGPVVVDLQRNVDDLNSAIAHIR 577
             A  +     V+L R    L   ++H R
Sbjct: 610 ATASDETAKSSVELARLGSQLQQMVSHFR 638