Pairwise Alignments

Query, 578 a.a., methyl-accepting chemotaxis protein from Vibrio cholerae E7946 ATCC 55056

Subject, 629 a.a., chemotaxis protein from Pseudomonas simiae WCS417

 Score =  186 bits (473), Expect = 2e-51
 Identities = 114/347 (32%), Positives = 190/347 (54%), Gaps = 3/347 (0%)

Query: 232 LVVVAIIAIIGYVVVNRKIVTPIDRMASVLQR-ADDNSDLTLRVEEKSDDELAVIGRTIN 290
           + VV IIA++G ++  R ++ P+  M   +Q  AD   DLT R+  ++ DE  ++G   N
Sbjct: 284 IAVVIIIALLGMLI--RILMQPLHLMTRAMQDIADGEGDLTRRLTIQNHDEFGMLGNAFN 341

Query: 291 KVLGSYGSTISKINQVNHTISSISDTIRSITDQNMKMSSQQDQELEMAATAMEEMTSALS 350
           + +    ++I +++     ++ ++  + S ++ +M  S +Q       A A+ ++ +A  
Sbjct: 342 RFVERIHTSIREVSSATEHVNEVALRVVSASNSSMVNSDEQANRTNSVAAAINQLGAAAQ 401

Query: 351 SVSQSTNMAEEYAGSAEKEANNSKQVFEKTIREFADLDGEFQKTSEIIQQLATESNNVGN 410
            ++++   A   A  A   A + +QV E+ I+    L      +S  I+ L +++ N+G 
Sbjct: 402 EIARNAAQASHQASDARHLAEDGQQVVERNIKAMNQLSSMISASSSNIEALNSKTVNIGQ 461

Query: 411 VLDVIKAIAEQTNLLALNAAIEAARAGEQGRGFAVVADEVRSLAQRTQESTGEIETMISM 470
           +L+VI +I++QTNLLALNAAIEAARAGE GRGFAVVADEVR+LA RTQES  +++ MI  
Sbjct: 462 ILEVITSISQQTNLLALNAAIEAARAGEAGRGFAVVADEVRNLAHRTQESAQQVQKMIEE 521

Query: 471 LQEKAEMSTKTIRVSADKMQSTRGNMGVANESLVAIQGSAKEIHKLNTSIAAATEEQLTV 530
           LQ  A  S  T+  S      +     +A E L ++     EI  +N S+A ATEEQ +V
Sbjct: 522 LQVGARESVSTMGESQRHSLESVDIANLAGERLNSVTQRIGEIDGMNQSVATATEEQTSV 581

Query: 531 SDEISSNLSTIKTLSGEMNLAIKQLGPVVVDLQRNVDDLNSAIAHIR 577
            + I+ +++ I TL+ E    ++       DL++    L   +   R
Sbjct: 582 VESINMDITEINTLNQEGVENLQSTLRACADLEQQAARLKQLVGSFR 628