Pairwise Alignments

Query, 578 a.a., methyl-accepting chemotaxis protein from Vibrio cholerae E7946 ATCC 55056

Subject, 544 a.a., chemotaxis protein from Pseudomonas simiae WCS417

 Score =  201 bits (511), Expect = 6e-56
 Identities = 125/338 (36%), Positives = 190/338 (56%), Gaps = 5/338 (1%)

Query: 218 AEQVKSTVLIG-NISLVVVAIIAIIGYVVVNRKIVTPIDRMASVLQRADDNSDLTLRVEE 276
           + QV     IG  I+LV+  ++++I   +V R +   ++ M ++   A   SDLT  ++ 
Sbjct: 187 SSQVWKASFIGLAIALVMALLVSLIARSIV-RPLQAAVNAMGNI---ASGESDLTRSLDT 242

Query: 277 KSDDELAVIGRTINKVLGSYGSTISKINQVNHTISSISDTIRSITDQNMKMSSQQDQELE 336
              DE+  + R  N         + ++    + +   S  + S   Q    S QQ Q++E
Sbjct: 243 HGQDEVTQLSRHFNSFTAKLRQVVGQLQVCANALGQSSQELGSNATQAHDRSQQQSQQME 302

Query: 337 MAATAMEEMTSALSSVSQSTNMAEEYAGSAEKEANNSKQVFEKTIREFADLDGEFQKTSE 396
           + ATA+ E+T  +  V+++   A      A+ +A   +   + ++++   L G   +  E
Sbjct: 303 LVATAINEVTYGVQDVAKNAEHAASEMRDAQAQAQQGQVNIDSSLQQIDQLSGTISQAVE 362

Query: 397 IIQQLATESNNVGNVLDVIKAIAEQTNLLALNAAIEAARAGEQGRGFAVVADEVRSLAQR 456
           +I+ L+ ES  +G+VL+VI++IA+QTNLLALNAAIEAARAGEQGRGFAVVADEVR LAQR
Sbjct: 363 VIRTLSAESTQIGSVLEVIRSIADQTNLLALNAAIEAARAGEQGRGFAVVADEVRLLAQR 422

Query: 457 TQESTGEIETMISMLQEKAEMSTKTIRVSADKMQSTRGNMGVANESLVAIQGSAKEIHKL 516
           TQ+ST EI+ MI  LQ  +E + K I  S    Q T    G A  SL AI  S + ++ L
Sbjct: 423 TQKSTAEIQGMIERLQGHSEAAVKVISDSHSASQMTIEQAGQAGASLTAIGESLRNLNGL 482

Query: 517 NTSIAAATEEQLTVSDEISSNLSTIKTLSGEMNLAIKQ 554
           N SIA+AT +Q  V ++I+ N++    LS    LA +Q
Sbjct: 483 NASIASATLQQAHVVEDINQNVTEAAGLSHSTALAAEQ 520