Pairwise Alignments

Query, 578 a.a., methyl-accepting chemotaxis protein from Vibrio cholerae E7946 ATCC 55056

Subject, 541 a.a., chemotaxis protein from Pseudomonas simiae WCS417

 Score =  195 bits (495), Expect = 4e-54
 Identities = 120/342 (35%), Positives = 193/342 (56%), Gaps = 1/342 (0%)

Query: 233 VVVAIIAIIGYVVVNRKIVTPIDRMASVLQRADDNSDLTLRVEEKSDDELAVIGRTINKV 292
           V  A++ ++   ++ R IVTP+ +   V +      +L+  +E+   DE A +   +  +
Sbjct: 197 VAAALLTVLLAWLLTRSIVTPLRKAVEVAETIA-GGNLSKAIEDDGKDEPARLLGALATM 255

Query: 293 LGSYGSTISKINQVNHTISSISDTIRSITDQNMKMSSQQDQELEMAATAMEEMTSALSSV 352
             +   TI  I      ++S ++ + ++T++  K   QQ+ E++ AATA+ EMT+A+  V
Sbjct: 256 QANLRQTIQHIAGSATQLASAAEELSAVTEEASKGLQQQNNEIDQAATAVNEMTAAVEEV 315

Query: 353 SQSTNMAEEYAGSAEKEANNSKQVFEKTIREFADLDGEFQKTSEIIQQLATESNNVGNVL 412
           +++     E +  + + A   +    +T+     +  + Q T+ +I+ LAT+  ++G VL
Sbjct: 316 ARNAVSTSEASSQSNQAAREGRDRVVETVGAIQTMTQDVQNTAAMIEGLATQGRDIGKVL 375

Query: 413 DVIKAIAEQTNLLALNAAIEAARAGEQGRGFAVVADEVRSLAQRTQESTGEIETMISMLQ 472
           DVI+AIAEQTNLLALNAAIEAARAGE GRGFAVVADEVR+LA RT +ST EIE M++ +Q
Sbjct: 376 DVIRAIAEQTNLLALNAAIEAARAGEAGRGFAVVADEVRALAHRTAQSTQEIEKMVAGIQ 435

Query: 473 EKAEMSTKTIRVSADKMQSTRGNMGVANESLVAIQGSAKEIHKLNTSIAAATEEQLTVSD 532
                + ++++ S  + Q+T      A  +L  I  S   I++ N  IA+A+EEQ  VS 
Sbjct: 436 NGTGEAVQSMQQSNQRTQTTLEMARAAGVALEQITQSISLINERNLVIASASEEQAQVSR 495

Query: 533 EISSNLSTIKTLSGEMNLAIKQLGPVVVDLQRNVDDLNSAIA 574
           E+  NL  I+ L+ +      Q      +L R   DLN  +A
Sbjct: 496 EVDRNLVNIRDLATQSAAGANQTSAASHELSRLAVDLNGMVA 537