Pairwise Alignments

Query, 578 a.a., methyl-accepting chemotaxis protein from Vibrio cholerae E7946 ATCC 55056

Subject, 643 a.a., methyl-accepting chemotaxis protein from Vibrio cholerae E7946 ATCC 55056

 Score =  190 bits (483), Expect = 1e-52
 Identities = 118/356 (33%), Positives = 190/356 (53%), Gaps = 3/356 (0%)

Query: 225 VLIGNISLVVVAIIAI-IGYVV-VNRKIVTPIDRM-ASVLQRADDNSDLTLRVEEKSDDE 281
           V + N     + +I I +G ++ +  +I  P+ R+  +VL  A  + DLT R+E   +D+
Sbjct: 286 VAVANAITTGIVLIGISVGVIIFIINQIYKPLLRLKVAVLDLAQGSGDLTRRLEVNGNDD 345

Query: 282 LAVIGRTINKVLGSYGSTISKINQVNHTISSISDTIRSITDQNMKMSSQQDQELEMAATA 341
           LA I    N+  G+  + + +I+     ISS  + +     +N +M      E +   TA
Sbjct: 346 LAQISEGFNRFSGNLQNMMLQISDATQIISSSIEQLSQTAKENEQMLISHSSETDQVVTA 405

Query: 342 MEEMTSALSSVSQSTNMAEEYAGSAEKEANNSKQVFEKTIREFADLDGEFQKTSEIIQQL 401
           + +M+ +  +V++S   + +   +A KEA  S  +    +     L  + +  SE I  +
Sbjct: 406 ITQMSESARTVAESVTQSNQITEAASKEAQQSLVIVNNAVSTVTSLVNDVENMSESISNM 465

Query: 402 ATESNNVGNVLDVIKAIAEQTNLLALNAAIEAARAGEQGRGFAVVADEVRSLAQRTQEST 461
             ++N +  VL VI AI+EQTNLLALNAAIEAARAGEQGRGFAVVADEVR+LA RTQ ST
Sbjct: 466 NRDANKISEVLSVIGAISEQTNLLALNAAIEAARAGEQGRGFAVVADEVRALAARTQNST 525

Query: 462 GEIETMISMLQEKAEMSTKTIRVSADKMQSTRGNMGVANESLVAIQGSAKEIHKLNTSIA 521
            EI  M++ L E  +     +  +  + Q+T       + SL  +  S  +I  L+T IA
Sbjct: 526 TEISDMLTKLLEGTDSVVGAMERTKQQCQTTADKTSEVSGSLNMMSASVSDIDDLSTQIA 585

Query: 522 AATEEQLTVSDEISSNLSTIKTLSGEMNLAIKQLGPVVVDLQRNVDDLNSAIAHIR 577
           AATE+Q TV+ E+S N+ +I+ +   + ++ +Q       L  +  +L   +   +
Sbjct: 586 AATEQQSTVAAELSRNMLSIREIVESLVVSGRQTVGATESLSHSNHELEQLVGKFK 641