Pairwise Alignments

Query, 578 a.a., methyl-accepting chemotaxis protein from Vibrio cholerae E7946 ATCC 55056

Subject, 547 a.a., methyl-accepting chemotaxis protein from Vibrio cholerae E7946 ATCC 55056

 Score =  197 bits (502), Expect = 7e-55
 Identities = 138/473 (29%), Positives = 241/473 (50%), Gaps = 43/473 (9%)

Query: 135 LLKEAQNNSDALV-----NMEVKAMNAVKGLFPDASGNYTVKGEPDVNMAVQLLHSEEYH 189
           +LKE Q  + AL+     N E+K  N V GL   A   Y    +  +   + LL+ E   
Sbjct: 87  VLKEKQTENLALLRSLADNPELK--NEVAGL-TQAMQRYV---DYSIQTMIPLLNIEHSD 140

Query: 190 REKAKIMAPIDRFFQELETRTAQQFNQAAEQVKSTVLIGN-------------------- 229
           +EK       +RF  + E  TA+      E +K+  ++ N                    
Sbjct: 141 QEKD------ERFTAQYEQATAEYRKVGNEMIKAIDVLSNRLNQVAMTTIDESEHEHDSV 194

Query: 230 -----ISLVVVAIIAIIGYVVVNRKIVTPIDRMASVLQRADDNSDLTLRVEEKSDDELAV 284
                 +L+ + ++A +   ++   IVTPI ++   + R     +L ++ +E+ ++E+ +
Sbjct: 195 MSQSTFALIGILLVAALSSWLLAGIIVTPIRQLQQTV-REIAKGNLLVKAQEEGNNEITL 253

Query: 285 IGRTINKVLGSYGSTISKINQVNHTISSISDTIRSITDQNMKMSSQQDQELEMAATAMEE 344
           + R +N  +     T+  + +++  ++S S  + ++  Q    S Q+ QE+E  A+A+ +
Sbjct: 254 LARDVNATVTQLRQTVESLVRISTDVASASTELATVMTQASVNSDQEKQEVEQVASAVNQ 313

Query: 345 MTSALSSVSQSTNMAEEYAGSAEKEANNSKQVFEKTIREFADLDGEFQKTSEIIQQLATE 404
           + S   SV+   + A+  A  A + A+ S ++FE++ R  A +  + ++ ++++ QL  +
Sbjct: 314 LQSTAQSVTDHAHSADGAAQQANQLASQSLRMFEESHRATAKMADQLREAAQVVNQLKEQ 373

Query: 405 SNNVGNVLDVIKAIAEQTNLLALNAAIEAARAGEQGRGFAVVADEVRSLAQRTQESTGEI 464
           S  +GNV +VI++I+EQTNLLALNAAIEAARAGE GRGFAVVADEVR LA RTQ ST EI
Sbjct: 374 SERIGNVTEVIRSISEQTNLLALNAAIEAARAGESGRGFAVVADEVRMLAARTQTSTQEI 433

Query: 465 ETMISMLQEKAEMSTKTIRVSADKMQSTRGNMGVANESLVAIQGSAKEIHKLNTSIAAAT 524
           + +I  LQ ++  +  ++  S   ++  +      + SL  I  S   + ++N  +A A+
Sbjct: 434 QAIIEELQNQSNTANSSMHSSLSLLEQNQSLAAKVSASLTEINHSISALGQINAQVATAS 493

Query: 525 EEQLTVSDEISSNLSTIKTLSGEMNLAIKQLGPVVVDLQRNVDDLNSAIAHIR 577
           EEQ  V+ +I+ NLS I  L  +    I Q      +L    +  +  + + R
Sbjct: 494 EEQSQVTKDINRNLSNIYELVSQNVTGITQSAAASHELSDLAEQQHQQLQYFR 546