Pairwise Alignments

Query, 578 a.a., methyl-accepting chemotaxis protein from Vibrio cholerae E7946 ATCC 55056

Subject, 556 a.a., methyl-accepting chemotaxis protein from Vibrio cholerae E7946 ATCC 55056

 Score =  193 bits (490), Expect = 2e-53
 Identities = 120/361 (33%), Positives = 194/361 (53%), Gaps = 4/361 (1%)

Query: 215 NQAAEQVKSTVLIGNISLVVVAIIAIIGYVVVNRKIVTPIDRMASVLQR-ADDNSDLTLR 273
           N    Q  S++L+  +  ++V I+      ++ R I  P +   + L+  A    DLT +
Sbjct: 195 NALVMQRLSSILVWVVGTLLVLIVLAS---LIGRSITQPCEETLATLKNIAQGEGDLTRQ 251

Query: 274 VEEKSDDELAVIGRTINKVLGSYGSTISKINQVNHTISSISDTIRSITDQNMKMSSQQDQ 333
           +     DELA I +  N         I +I  +  +++  +D +  +       +  Q Q
Sbjct: 252 LTVTGKDELAQIAQAFNLFTNKIRHIIQEITPITESVTGSADELTQVAQSASSKAYDQHQ 311

Query: 334 ELEMAATAMEEMTSALSSVSQSTNMAEEYAGSAEKEANNSKQVFEKTIREFADLDGEFQK 393
            ++  A+AM ++ ++   V+QS + AE+ A SA + A+  +++   T  +   L  +  +
Sbjct: 312 AVDTVASAMNQLHASNQEVAQSAHQAEQAAHSANQAASQGREMITLTSTQMQSLRDQLTR 371

Query: 394 TSEIIQQLATESNNVGNVLDVIKAIAEQTNLLALNAAIEAARAGEQGRGFAVVADEVRSL 453
           T +  Q LA+E+ +V  VL+VI+ +AEQTNLLALNAAIEAARAGEQGRGFAVVADEVR+L
Sbjct: 372 TEQETQVLASETQSVSAVLEVIRGVAEQTNLLALNAAIEAARAGEQGRGFAVVADEVRTL 431

Query: 454 AQRTQESTGEIETMISMLQEKAEMSTKTIRVSADKMQSTRGNMGVANESLVAIQGSAKEI 513
           A RTQ ST EIE +I+ LQ+KA+  ++++  +  + + T+     A + L  I+   K I
Sbjct: 432 ATRTQASTNEIEQIIAQLQKKAQSVSQSMTQTQQQSRVTQQQAEQAQQMLNEIEAQIKTI 491

Query: 514 HKLNTSIAAATEEQLTVSDEISSNLSTIKTLSGEMNLAIKQLGPVVVDLQRNVDDLNSAI 573
              N  IA A+ +Q   +DEI+ NL+ I   S + +    Q+      L  N   L  ++
Sbjct: 492 LSFNQHIAGASAQQSEATDEITRNLTQIAEHSTQASAQANQVAAASEQLMENGQHLARSL 551

Query: 574 A 574
           A
Sbjct: 552 A 552