Pairwise Alignments

Query, 578 a.a., methyl-accepting chemotaxis protein from Vibrio cholerae E7946 ATCC 55056

Subject, 544 a.a., Methyl-accepting chemotaxis transducer from Pseudomonas putida KT2440

 Score =  197 bits (502), Expect = 7e-55
 Identities = 123/361 (34%), Positives = 193/361 (53%), Gaps = 5/361 (1%)

Query: 218 AEQVKSTVLIGNISLVVVAIIAIIGYVVVNRKIVTPIDRMASVLQR-ADDNSDLTLRVEE 276
           A Q++   L+G    V +A++  +  +++ R I  P+      +   A   SDLT R++ 
Sbjct: 187 ARQLRDASLVG----VGIALLMALVVMLIARSIARPLQEAVQAMGNIASGESDLTRRLDT 242

Query: 277 KSDDELAVIGRTINKVLGSYGSTISKINQVNHTISSISDTIRSITDQNMKMSSQQDQELE 336
              DE+  +G   N+  G     + ++    H ++  +  +        + S+QQ  +++
Sbjct: 243 HGSDEITHLGEHFNRFNGKLQGVVGQLQGAAHALAQSAGHVGDNAGAAQQRSAQQSLQMD 302

Query: 337 MAATAMEEMTSALSSVSQSTNMAEEYAGSAEKEANNSKQVFEKTIREFADLDGEFQKTSE 396
             ATA+ E+T A+  V+++   A     +A+++  + +Q    ++ +   L     +  +
Sbjct: 303 QVATAVNEVTYAVQDVAKTAEQAAGEMRTAQQQVTHGQQAIHGSLAQIDRLSLTIDEAVQ 362

Query: 397 IIQQLATESNNVGNVLDVIKAIAEQTNLLALNAAIEAARAGEQGRGFAVVADEVRSLAQR 456
           +I+ LA  S  +G VLDVI++IAEQTNLLALNAAIEAARAGEQGRGFAVVADEVR LAQR
Sbjct: 363 VIRDLAGHSTRIGGVLDVIRSIAEQTNLLALNAAIEAARAGEQGRGFAVVADEVRLLAQR 422

Query: 457 TQESTGEIETMISMLQEKAEMSTKTIRVSADKMQSTRGNMGVANESLVAIQGSAKEIHKL 516
           T +ST EI TMI  LQ +++ + K I  S++  + T      A  SL AI      +  L
Sbjct: 423 TAQSTAEIHTMIEHLQSQSDAAVKAIDTSSEASRQTVEQAREAGASLDAINQVLNNLTAL 482

Query: 517 NTSIAAATEEQLTVSDEISSNLSTIKTLSGEMNLAIKQLGPVVVDLQRNVDDLNSAIAHI 576
           N SIA+AT +Q  V +EI+ N+     LS +   A +Q     V L R  ++L   +   
Sbjct: 483 NASIASATLQQSHVVEEINRNVLDTAGLSQQTADAARQSSDAGVALGRLSEELEQLLRQF 542

Query: 577 R 577
           R
Sbjct: 543 R 543