Pairwise Alignments

Query, 578 a.a., methyl-accepting chemotaxis protein from Vibrio cholerae E7946 ATCC 55056

Subject, 643 a.a., Methyl-accepting chemotaxis protein PctB from Pseudomonas putida KT2440

 Score =  182 bits (462), Expect = 4e-50
 Identities = 111/360 (30%), Positives = 194/360 (53%), Gaps = 21/360 (5%)

Query: 217 AAEQVKSTVLIGNISLVVVAIIAIIGYVVVNRKIVTPIDRMASVLQR-ADDNSDLTLRVE 275
           A  Q +++ +I  + + V AI  ++G ++    +++P+  M   ++  A+   DLT R+ 
Sbjct: 284 ALSQFRTSAIIAML-IAVAAIAGLLGLLIP--VLMSPLTTMGRAMRDIAEGEGDLTRRLA 340

Query: 276 EKSDDELAVIGRTINKVLGSYGSTISKINQVNHTISSISDTIRSITDQNMKMSSQQDQEL 335
            ++ DE   +  + N+ +    ++IS+++     +  +S+ + S ++ ++  S +Q    
Sbjct: 341 VQNKDEFGELATSFNRFVERIHASISEVSSATRLVHDLSEKVVSASNASIIGSEEQSMRT 400

Query: 336 EMAATAMEEMTSALSSVSQSTNMAEEYAGSAEKEANNSKQVFEKTIREFADLDGEFQKTS 395
              A A+ E+ +A   ++++   A ++A  A ++A+  ++V E+ I     L     ++ 
Sbjct: 401 NSVAAAINELGAATQEIARNAADASQHASGASEQAHGGREVVEEAISAMTALSQRISESC 460

Query: 396 EIIQQLATESNNVGNVLDVIKAIAEQTNLLALNAAIEAARAGEQGRGFAVVADEVRSLAQ 455
             I+ L   ++ +G +LDVIK I++QTNLLALNAAIEAARAGE GRGFAVVADEVR+LA 
Sbjct: 461 AQIETLNASTDEIGKILDVIKGISQQTNLLALNAAIEAARAGEAGRGFAVVADEVRNLAH 520

Query: 456 RTQESTGEIETMISMLQEKAEMSTKTIRVSADKMQSTRGNMGVANESLVAIQGSAKEIHK 515
           RTQES  EI  MI+ LQ  +  +  T+  S    + T      A E L ++     EI  
Sbjct: 521 RTQESAEEIHRMITSLQVGSREAVHTMNTSQVSSEQTVQVANQAGERLASVTQRIGEIDG 580

Query: 516 LNTSIAAATEEQLTVSDEISSNLSTIKTLSGEMNLAIKQLGPVVVDLQRNVDDLNSAIAH 575
           +N S+A ATEEQ  V + ++ +++ I  L+                 Q+ V++LN  + H
Sbjct: 581 MNQSVATATEEQTAVVESLNLDITQINALN-----------------QQGVENLNETLRH 623