Pairwise Alignments

Query, 578 a.a., methyl-accepting chemotaxis protein from Vibrio cholerae E7946 ATCC 55056

Subject, 555 a.a., Methyl-accepting chemotaxis protein CtpH from Pseudomonas putida KT2440

 Score =  189 bits (479), Expect = 3e-52
 Identities = 125/394 (31%), Positives = 202/394 (51%), Gaps = 20/394 (5%)

Query: 200 DRFFQELETRTAQQFNQAAEQVKS---------------TVLIGNISLVVVAI-IAIIGY 243
           DR  + ++   ++Q ++  EQ+++               TV +G + ++  A+ + ++  
Sbjct: 162 DRAVKGVDRAASEQMSELVEQLRADARQRAASINASAERTVWLGLLVMLASAVLVGLLSL 221

Query: 244 VVVNRKIVTPIDRMASVLQRADDNSDLTLRVEEKSDDELAVIGRTINKVLGSYGSTISKI 303
            +VNR ++ PI ++   + +    S    RV+ + +DEL  + R  N +      T+ ++
Sbjct: 222 WLVNRSLIEPIRQLIEYVAQLSQGS-FAARVDSRREDELGRLARAANTLRDFLADTVGRL 280

Query: 304 NQVNHTISSISDTIRSITDQNMKMSSQQDQELEMAATAMEEMTSALSSVSQSTNMAEEYA 363
                 +   S  +RSI     + +  Q Q  +  ATAM EM++    V++    A   A
Sbjct: 281 QDNAQELEGASGQLRSIAGDMARGTHDQFQRTDQVATAMHEMSATAQEVARHAAEAARAA 340

Query: 364 GSAEKEANNSKQVFEKTIREFADLDGEFQKTSEIIQQLATESNNVGNVLDVIKAIAEQTN 423
             A+  A   +QV ++TI     ++ E   T+ +I+ L  +S  +G VL+VI+ IAEQTN
Sbjct: 341 DDADHSAQAGEQVMQQTIDIIGLVNREIAGTATVIRDLEHDSTRIGKVLEVIRGIAEQTN 400

Query: 424 LLALNAAIEAARAGEQGRGFAVVADEVRSLAQRTQESTGEIETMISMLQEKAEMSTKTIR 483
           LLALNAAIEAARAGE GRGFAVVADEVRSLAQRT  S  EI  +I  +Q  A  + K I 
Sbjct: 401 LLALNAAIEAARAGEAGRGFAVVADEVRSLAQRTAASIAEIHQIIEAVQSGAVEAVKAIE 460

Query: 484 VSADKMQSTRGNMGVANESLVAIQGSAKEIHKLNTSIAAATEEQLTVSDEISSNL---ST 540
               + Q     +  A + L  I  + + I  +N  IA A EEQ +V+++IS NL   + 
Sbjct: 461 SGQQRSQEGAEQVEQAGQMLQRITQAVEAIRDMNRQIATAAEEQTSVAEDISRNLIEITR 520

Query: 541 IKTLSGEMNLAIKQLGPVVVDLQRNVDDLNSAIA 574
           I T + E     +Q G  +  L   + ++ S ++
Sbjct: 521 IATANQEAVQHTEQAGQRLHGLSGQLGEVTSRLS 554