Pairwise Alignments

Query, 578 a.a., methyl-accepting chemotaxis protein from Vibrio cholerae E7946 ATCC 55056

Subject, 645 a.a., Methyl-accepting chemotaxis transducer from Pseudomonas putida KT2440

 Score =  198 bits (503), Expect = 6e-55
 Identities = 143/457 (31%), Positives = 234/457 (51%), Gaps = 17/457 (3%)

Query: 119 LQQMMKDLGFSDREFALLKEAQNNSDALVNMEVKAMNAVKGLFPDASGNYTVKGEPDVNM 178
           L +++ D  F +     L      +D L+ +   A  + K    +  G    KG   V  
Sbjct: 191 LSKLIHDFSFGEHGKVFLVR----NDGLIQVHPDAAFSGKRQLAEQLGADAAKG---VMT 243

Query: 179 AVQLLHSEEYHREKAKIMA---PIDRFFQEL--ETRTAQQFNQAAEQVKSTVLIGNISLV 233
             + L S  + R+  + +A   P+      L  E   ++ + Q  + V  T LIG     
Sbjct: 244 GGESLRSSRFSRDGERYLALGLPLRDLNWTLVAEVPESEIYAQMHQAVWLTSLIGG---- 299

Query: 234 VVAIIAIIGYVVVNRKIVTPIDRM-ASVLQRADDNSDLTLRVEEKSDDELAVIGRTINKV 292
            VA+++++  V++ R +V PI R+ A+++Q      DL+ R+++   DEL  + R  N+ 
Sbjct: 300 AVALVSLLLVVLLARGLVRPIRRVTAALVQIGSGAGDLSHRLDDSRQDELGDLARGFNRF 359

Query: 293 LGSYGSTISKINQVNHTISSISDTIRSITDQNMKMSSQQDQELEMAATAMEEMTSALSSV 352
           L S  S I ++   +  +    + +  + D   + S +Q +  EM ATA+ EM   +  +
Sbjct: 360 LDSQRSLIGEVLSTSERLRRAVEQVTQVVDNTAERSGRQQEMTEMVATAVHEMGLTVQDI 419

Query: 353 SQSTNMAEEYAGSAEKEANNSKQVFEKTIREFADLDGEFQKTSEIIQQLATESNNVGNVL 412
           +++   A + + SA  EA  +++V +++IR    + G+  K ++ + QLA E  +V  VL
Sbjct: 420 ARNAGDAAQASQSARDEALQAREVVQRSIRGIEGMSGDIGKAADAVSQLADEVASVDEVL 479

Query: 413 DVIKAIAEQTNLLALNAAIEAARAGEQGRGFAVVADEVRSLAQRTQESTGEIETMISMLQ 472
            VI++I+EQTNLLALNAAIEAARAGE GRGFAVVADEVR+LA+RTQ ST E++ MI  L+
Sbjct: 480 AVIRSISEQTNLLALNAAIEAARAGEMGRGFAVVADEVRTLARRTQLSTDEVQQMIQRLK 539

Query: 473 EKAEMSTKTIRVSADKMQSTRGNMGVANESLVAIQGSAKEIHKLNTSIAAATEEQLTVSD 532
             A  +  +++       S   +      SL AI    + I  +N  +A ATEEQ  V++
Sbjct: 540 LGAGSAVSSMQAGQQATGSGVESSQRTGASLSAITDQVEHISDMNHQVATATEEQSAVTE 599

Query: 533 EISSNLSTIKTLSGEMNLAIKQLGPVVVDLQRNVDDL 569
           EI+  +  I  L+ E    ++        L+   DDL
Sbjct: 600 EINRTVQGISDLARETAAEVQGCREECQALRGLADDL 636